Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_L11
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 159 2e-39
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 139 2e-33
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 134 5e-32
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 111 5e-25
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 84 9e-17
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.052
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 4.5
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 28 7.9
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 159 bits (386), Expect = 2e-39
Identities = 79/227 (34%), Positives = 134/227 (59%), Gaps = 2/227 (0%)
Frame = -2
Query: 676 GMPCWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWRTSMGQH 497
G PCW+R P+VG+ A D +++ + + + +F+ Y+ + +LFNE ++T+ GQ
Sbjct: 137 GQPCWFRVPQVGLI-AVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQL 195
Query: 496 LDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENVDEKIYKSAQDI 323
LD +T + + D + + L + LPV+ LLL+ EN+D + ++I
Sbjct: 196 LDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENLDN--FGDVKNI 253
Query: 322 CLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYG 143
+E+GT FQ+QDD++DC+GD GK+GTDI++ KC+WL VQAL+R E Q+ + YG
Sbjct: 254 LVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADENQKHILFENYG 313
Query: 142 SSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIEXIPIEAAR 2
+P V ++K LY++L+L ++ E+ Y+ +I IE P +A +
Sbjct: 314 KPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHPNKAVQ 360
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 139 bits (337), Expect = 2e-33
Identities = 70/206 (33%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Frame = -2
Query: 631 AFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSS 455
A D +++ + + + +FR Y + +LFNE ++T+ GQ LD +T + + D +
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNK 176
Query: 454 FTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFID 275
+ + + LPV+ LLL+ D Y + +DI +++G FQ+QDD++D
Sbjct: 177 YNIGVHRRIVQYKTSYYSFYLPVACALLLSGE-DLTKYGAVEDILVKMGIYFQVQDDYLD 235
Query: 274 CFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYED 95
C+GD GK+GTDI++ KC+WL VQAL+R E+Q++V YG +PA V ++K LY +
Sbjct: 236 CYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRE 295
Query: 94 LHLPQIYKHQEKAMYDNIIRQIEXIP 17
L+L ++ E Y +I IE P
Sbjct: 296 LNLEAVFLDYENESYKKLIADIEAQP 321
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 134 bits (325), Expect = 5e-32
Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
Frame = -2
Query: 667 CWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWRTSMGQHLDH 488
CWY+ P VG++ A D +L+ + K F+ ++ + EL+NE +T+MGQ LD
Sbjct: 172 CWYKLPTVGMS-AINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLDL 230
Query: 487 VTGNRKT-DYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 311
+T + D + + + + LPV+ LLL Y +++ +E+
Sbjct: 231 ITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLL-NGARLSDYVELKNVLIEM 289
Query: 310 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 131
G FQIQDD++DCFGD GKVGTDI++ KC+WL VQA++ E + + YG S+P
Sbjct: 290 GVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSDP 349
Query: 130 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIE 26
V +K +Y +L L I+ E +Y +++ I+
Sbjct: 350 KCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTID 384
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 111 bits (267), Expect = 5e-25
Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Frame = -2
Query: 649 EVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHV-TGNR 473
+VG+ D +++ + K FR P ++ + E+++E +TS+GQ LD + T
Sbjct: 190 QVGLR-GINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTG 248
Query: 472 KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQI 293
D + ++++ + LPV+ LLL+ E + +DI +E+G FQI
Sbjct: 249 ADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLED-FSGLKDILIEMGIYFQI 307
Query: 292 QDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERI 113
QDD++DCF D GK+GTDI++ KC+WL VQAL Q V YG + + V +
Sbjct: 308 QDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEV 367
Query: 112 KRLYEDLHL 86
KR Y L L
Sbjct: 368 KRTYAALDL 376
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 84.2 bits (199), Expect = 9e-17
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 676 GMPCWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWRTSMGQH 497
G PCW+R P+VG+ A D L++ S + + FR Y+ + +LFNE +T+ GQ
Sbjct: 101 GKPCWFRLPKVGLI-AINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQTTSGQL 159
Query: 496 LDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENVDEKIYKSAQDIC 320
LD +T N L++ + LPV+ LLL E++D Y + I
Sbjct: 160 LDQITTNEGRK----DLNKYRRIVEYKTAYYSFYLPVACALLLFDESLDN--YAQVKHIL 213
Query: 319 LEIGTMFQIQDDFIDCFGDEIKTGK 245
+E+G FQ QDD++DCFG+ GK
Sbjct: 214 VEMGVYFQSQDDYLDCFGEPEIIGK 238
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -2
Query: 184 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIEXIPIEAA 5
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE P EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 4 R 2
R
Sbjct: 289 R 289
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.052
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 388 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 212
V +G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T
Sbjct: 260 VVIGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT 318
Query: 211 WLAVQALQRCTE 176
+ + L++ E
Sbjct: 319 YPKLLGLEKSRE 330
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -2
Query: 382 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 203
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 202 VQALQRCTEA 173
+ + TE+
Sbjct: 275 LTKVGDHTES 284
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 212 STFALLYICTNFTSFYFIT 268
STF L+Y+ +F SF+FIT
Sbjct: 467 STFGLVYLIYSFCSFHFIT 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,269,016
Number of Sequences: 37544
Number of extensions: 320059
Number of successful extensions: 629
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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