Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_L06
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 223 7e-59
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 223 1e-58
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 113 8e-26
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 113 1e-25
06_01_0539 + 3869156-3869908 107 7e-24
06_01_0529 + 3831100-3831852 107 7e-24
06_01_0479 + 3419657-3420337 107 7e-24
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 91 5e-19
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 81 7e-16
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 75 5e-14
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 72 3e-13
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 68 5e-12
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 58 6e-09
11_04_0445 + 17818190-17818874,17819730-17819749 31 0.75
04_03_0147 - 11853940-11854128,11854933-11855013,11855501-118555... 30 1.7
02_01_0513 + 3715406-3715543,3716298-3716708,3716882-3717085,371... 29 4.0
07_03_1614 + 28152812-28153204,28153301-28153585,28153676-281539... 28 7.0
02_05_0671 - 30769631-30769803,30770535-30770873,30770952-307710... 28 7.0
05_03_0394 - 13440871-13441098,13441197-13441394,13441491-134415... 27 9.2
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 223 bits (546), Expect = 7e-59
Identities = 112/175 (64%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Frame = -3
Query: 625 KSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYI 446
KS KLQ+ R++RKI LD H+ +A AGL ADAR+LINRA++ECQSH+LTVEDPVT+EYI
Sbjct: 119 KSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYI 178
Query: 445 TRYIAGLKQKYTQSNGRRPFGISCLIGGFD-YDGSPHLFQTEPSGIYYEWKANATGRSAK 269
TRYIAGL+QKYTQS G RPFG+S LI GFD Y P L+QT+PSG + WKANATGR++
Sbjct: 179 TRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSN 238
Query: 268 TVREFLEKNYTADEVATENGAVKLAIRALLEVVQSGQKNLEIAVMRRGQPMQMLD 104
++REFLEKNY D E +KLAIRALLEVV+SG KN+EIAVM ++ L+
Sbjct: 239 SMREFLEKNY-KDTSGKE--TIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELE 290
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 223 bits (544), Expect = 1e-58
Identities = 110/175 (62%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Frame = -3
Query: 625 KSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYI 446
KS KLQ+ R+VRKI LD H+ +A AGL ADAR+LINRA++ECQSH+LTVED VT+EYI
Sbjct: 49 KSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYI 108
Query: 445 TRYIAGLKQKYTQSNGRRPFGISCLIGGFD-YDGSPHLFQTEPSGIYYEWKANATGRSAK 269
TRYIAGL+QKYTQS G RPFG+S LI GFD Y P L+QT+PSG + WKANATGR++
Sbjct: 109 TRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSN 168
Query: 268 TVREFLEKNYTADEVATENGAVKLAIRALLEVVQSGQKNLEIAVMRRGQPMQMLD 104
++REFLEKNY + + +KLAIRALLEVV+SG KN+EIAVM + ++ L+
Sbjct: 169 SMREFLEKNY---KETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLE 220
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 113 bits (273), Expect = 8e-26
Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Frame = -3
Query: 610 LQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIA 431
L +E +V+KI L ++ + ++G+ D R+L+ +++ + Q + ++ + + + R A
Sbjct: 79 LVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETA 138
Query: 430 GLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFL 251
+ Q++TQS G RPFG+S LI G+D D P L+Q +PSG Y+ WKA+A G++ + FL
Sbjct: 139 AVMQEFTQSGGVRPFGVSLLIAGYD-DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 197
Query: 250 EKNYTADEVATENGAVKLAIRALLEVV--QSGQKNLEIAVMRRGQPMQML 107
EK YT D + A+ AI L E Q N+EI V+R + ++L
Sbjct: 198 EKRYTEDMELDD--AIHTAILTLKEGYEGQISANNIEIGVIRSDREFKVL 245
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 113 bits (272), Expect = 1e-25
Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Frame = -3
Query: 610 LQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIA 431
L +E +V+KI L ++ + ++G+ D R+L+ +++ + Q + ++ + + + R A
Sbjct: 116 LVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETA 175
Query: 430 GLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFL 251
+ Q++TQS G RPFG+S LI G+D D P L+Q +PSG Y+ WKA+A G++ + FL
Sbjct: 176 AVMQEFTQSGGVRPFGVSLLIAGYD-DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 234
Query: 250 EKNYTADEVATENGAVKLAIRALLEVV--QSGQKNLEIAVMRRGQPMQML 107
EK YT D + A+ AI L E Q N+EI ++R + ++L
Sbjct: 235 EKRYTEDMELDD--AIHTAILTLKEGYEGQISANNIEIGIIRSDREFKVL 282
>06_01_0539 + 3869156-3869908
Length = 250
Score = 107 bits (257), Expect = 7e-24
Identities = 52/149 (34%), Positives = 87/149 (58%)
Frame = -3
Query: 610 LQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIA 431
LQ R+ K+ +D H+ A AG+ +DA IL+N A++ Q + L+ ++P+ +E + + +
Sbjct: 56 LQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLC 115
Query: 430 GLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFL 251
KQ YTQ G RPFG+S L G+D L+ ++PSG Y WKA A G +++ + L
Sbjct: 116 DTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSML 175
Query: 250 EKNYTADEVATENGAVKLAIRALLEVVQS 164
+++Y + T AV LA++ L + + S
Sbjct: 176 KQDYR--DGMTREEAVALALKVLSKTMDS 202
>06_01_0529 + 3831100-3831852
Length = 250
Score = 107 bits (257), Expect = 7e-24
Identities = 52/149 (34%), Positives = 87/149 (58%)
Frame = -3
Query: 610 LQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIA 431
LQ R+ K+ +D H+ A AG+ +DA IL+N A++ Q + L+ ++P+ +E + + +
Sbjct: 56 LQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLC 115
Query: 430 GLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFL 251
KQ YTQ G RPFG+S L G+D L+ ++PSG Y WKA A G +++ + L
Sbjct: 116 DTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSML 175
Query: 250 EKNYTADEVATENGAVKLAIRALLEVVQS 164
+++Y + T AV LA++ L + + S
Sbjct: 176 KQDYR--DGMTREEAVALALKVLSKTMDS 202
>06_01_0479 + 3419657-3420337
Length = 226
Score = 107 bits (257), Expect = 7e-24
Identities = 52/149 (34%), Positives = 87/149 (58%)
Frame = -3
Query: 610 LQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIA 431
LQ R+ K+ +D H+ A AG+ +DA IL+N A++ Q + L+ ++P+ +E + + +
Sbjct: 32 LQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLC 91
Query: 430 GLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFL 251
KQ YTQ G RPFG+S L G+D L+ ++PSG Y WKA A G +++ + L
Sbjct: 92 DTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSML 151
Query: 250 EKNYTADEVATENGAVKLAIRALLEVVQS 164
+++Y + T AV LA++ L + + S
Sbjct: 152 KQDYR--DGLTREEAVALALKVLSKTMDS 178
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 91.5 bits (217), Expect = 5e-19
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Frame = -3
Query: 610 LQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIA 431
L E +V KI +D+H+ A +GL ADAR L+ A++E Q+H+ + +P+T+E T+ I
Sbjct: 71 LLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAIC 130
Query: 430 GLKQKYTQSNGR---RPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVR 260
L ++ + + RPFG+S LI G D +G P L+ T+PSG +++ A A G ++
Sbjct: 131 DLALRFGEGDEESMSRPFGVSLLIAGHDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGAD 189
Query: 259 EFLEKNY 239
L++ Y
Sbjct: 190 SSLQEQY 196
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 81.0 bits (191), Expect = 7e-16
Identities = 47/159 (29%), Positives = 81/159 (50%)
Frame = -3
Query: 613 KLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYI 434
KL + +V + + ++ + GLTADAR L+ +A+ E + + ++ + ++I
Sbjct: 59 KLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWI 118
Query: 433 AGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREF 254
A Q YTQ RP G+ ++ G+D + + LF+ +P+G ++ KA + G + F
Sbjct: 119 ADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINF 178
Query: 253 LEKNYTADEVATENGAVKLAIRALLEVVQSGQKNLEIAV 137
LEK D + V++AI AL V+Q K EI V
Sbjct: 179 LEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEV 217
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 74.9 bits (176), Expect = 5e-14
Identities = 40/122 (32%), Positives = 67/122 (54%)
Frame = -3
Query: 559 VMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGI 380
VMA AGL AD R +++RA+ E S++ +P++++ + +A T RPFG
Sbjct: 83 VMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGC 142
Query: 379 SCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVK 200
++GG+D DG P L+ EPSG+ Y++ A G+ + + +EK E+ G V+
Sbjct: 143 GVILGGYDRDG-PQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK-LKLSELTCREGIVE 200
Query: 199 LA 194
+A
Sbjct: 201 VA 202
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 72.1 bits (169), Expect = 3e-13
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 36/198 (18%)
Frame = -3
Query: 589 RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYIT----------R 440
RK+ + DH +A AGLTAD R+L + EC +H + P+ + +
Sbjct: 36 RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQPDM 95
Query: 439 YIAGLK-----------------QKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGI 311
YI G+ Q TQ + +RP+G+ L+ G D G+ HL+ PSG
Sbjct: 96 YIFGITICPTTFLWIMSVSLMVLQVCTQRSWKRPYGVGLLVAGLDESGA-HLYYNCPSGN 154
Query: 310 YYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAIRALLEVVQSGQK----NLEI 143
Y+E++A A G ++ + FLE+ + T +K A+ A+ E +Q G+K N +
Sbjct: 155 YFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQ-GEKLTSSNCTV 213
Query: 142 AVMRRG-----QPMQMLD 104
A++ R +P +M+D
Sbjct: 214 AIVGRKDDGTVEPFEMID 231
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 68.1 bits (159), Expect = 5e-12
Identities = 37/125 (29%), Positives = 65/125 (52%)
Frame = -3
Query: 589 RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYT 410
R++ + H +A AGL AD R +++RA+ E S++ +P+ ++ + +A T
Sbjct: 65 RRLHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCT 124
Query: 409 QSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTAD 230
RPFG ++GG+D DG P L+ EPSG+ Y++ A G+ + + + D
Sbjct: 125 LYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGLSYKYFGAALGKGRQAAKTCVYDGSRKD 183
Query: 229 EVATE 215
+ A E
Sbjct: 184 DSAFE 188
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = -3
Query: 613 KLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYI 434
KL + T+ + + D + + G+ D R + A+ + ++ + ++I
Sbjct: 117 KLHDPTTITNLFAITDRIGLLATGMPGDGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWI 176
Query: 433 AGLKQKYTQSNGRRPFGISCLIGGFDYD-GSPHLFQTEPSGIYYEWKANATGRSAKTVRE 257
A Q TQ RP+G+ +I G D + G+P LF +P+G ++ KA + G K V
Sbjct: 177 ADRAQIRTQHAQIRPYGVVSMIFGIDEEKGTPELFTCDPAGQFFAHKATSAGPKEKEVMN 236
Query: 256 FLEK 245
FLE+
Sbjct: 237 FLEE 240
>11_04_0445 + 17818190-17818874,17819730-17819749
Length = 234
Score = 31.1 bits (67), Expect = 0.75
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = -3
Query: 538 TADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRP--FGISCLIG 365
TA R+L + V + T+E + ++ G++ + Q R+P I CL+
Sbjct: 135 TAAIRMLAYGTPADLMDETFGVAESTTMECMINFVQGVRHIFGQQYLRKPNEQDIQCLLQ 194
Query: 364 GFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKN 242
+ G P + + +++EW+ + R+ LE N
Sbjct: 195 QGEAHGFPGMLGSLDC-MHWEWQNCPVAWKGQFTRDLLEHN 234
>04_03_0147 -
11853940-11854128,11854933-11855013,11855501-11855584,
11855663-11855735,11855888-11855949,11856246-11856327,
11857643-11858262
Length = 396
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 340 HLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTA 233
+LF +EP ++ KA++T R KT+ FLE+ A
Sbjct: 311 NLFHSEPGNGLWKRKADSTLRHCKTLESFLEETLDA 346
>02_01_0513 +
3715406-3715543,3716298-3716708,3716882-3717085,
3717552-3717729,3717833-3717951
Length = 349
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 194 YQSTLGSSTVWPKEPRNCCNEKRSTNADA*LRQRDTPMELA 72
+ S LGS T + R CC + + A + +D+P+ LA
Sbjct: 13 HHSLLGSPTCLARPRRRCCPVRAAVAVQAEAQAKDSPLALA 53
>07_03_1614 +
28152812-28153204,28153301-28153585,28153676-28153993,
28154657-28154884,28155390-28155490,28156204-28156321,
28156445-28156726
Length = 574
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 622 SVAKLQEERTVRKIC---LLDDHVVMAFAGLTADARILINRAQIECQSHKL 479
+V KL T R C L+ D++V AGL A I Q++C H+L
Sbjct: 184 NVIKLDGLVTSRMSCSLYLVFDYMVHDLAGLAASPEIKFTLPQVKCYVHQL 234
>02_05_0671 -
30769631-30769803,30770535-30770873,30770952-30771036,
30771229-30771369,30771802-30771873,30772183-30772302,
30772606-30772677,30772758-30772895,30773249-30773320,
30773609-30773685,30773761-30773837,30773960-30774077,
30774852-30774930
Length = 520
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 491 ITQVNSRGSSNIGVYYKIHSRSQTEIYSEQWSSTIWYFVFDR 366
I+ NS S +GV+ + + +Q Y++ S IW F+ DR
Sbjct: 417 ISPSNSCPSHYVGVFQDLPAGTQFPSYADDISRFIWNFLADR 458
>05_03_0394 -
13440871-13441098,13441197-13441394,13441491-13441594,
13441687-13442551,13442677-13443045,13443372-13443533,
13443838-13444056,13444138-13444656,13444742-13444819,
13446041-13446163
Length = 954
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = -3
Query: 502 IECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISC--LIGGFDYDGSPHLFQ 329
+ C + ++ V+ L+ + + +G + + SN R P+G+SC L GS F+
Sbjct: 232 VVCPTDEVEVDYGADLD-TSMFSSGFSKLSSDSNRRDPYGLSCWNLNNLPRIPGSVLSFE 290
Query: 328 TEP-SGIYYEW 299
TE SG+ W
Sbjct: 291 TEDISGVVVPW 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,040,645
Number of Sequences: 37544
Number of extensions: 299687
Number of successful extensions: 673
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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