Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_L06
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 229 9e-61
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 95 3e-20
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 93 1e-19
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 87 7e-18
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 68 6e-12
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 38 0.006
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 29 2.1
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 29 2.1
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 29 2.1
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 3.6
AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine re... 28 4.8
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 229 bits (561), Expect = 9e-61
Identities = 102/166 (61%), Positives = 138/166 (83%)
Frame = -3
Query: 625 KSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYI 446
KS+ LQ++RT+RKI ++DDHV++AFAGL+ADAR+L++RA+IECQS+KLT+EDPVT+ YI
Sbjct: 49 KSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYI 108
Query: 445 TRYIAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKT 266
+RYIA KQ++TQS GRRPFGIS LIGGFD+DG+P LF+TEPSG YYE+ ANATGR K
Sbjct: 109 SRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKP 168
Query: 265 VREFLEKNYTADEVATENGAVKLAIRALLEVVQSGQKNLEIAVMRR 128
VRE+LE+ Y+ + E +KL +++L +VV G +N+EIAVM++
Sbjct: 169 VREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIAVMKK 214
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 95.5 bits (227), Expect = 3e-20
Identities = 56/154 (36%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Frame = -3
Query: 586 KICLLDDHVVMAFAGLTADARILINRAQ-IECQSHKLTVEDPVTLEYITRYIAGLKQKYT 410
K+ + H+ ++G+ D RIL+ +A+ I + + E+ T++ +T IA + Q+YT
Sbjct: 60 KVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQEYT 118
Query: 409 QSNGRRPFGISCLIGGFDYD-GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTA 233
QS G RPFG S LI G+D + G P LFQ +PSG Y+ WKA A G++ + FLEK ++
Sbjct: 119 QSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFS- 177
Query: 232 DEVATENGAVKLAIRALLEVVQSG--QKNLEIAV 137
E + + A+ L E G + N+E+AV
Sbjct: 178 -EALELDDGIHTALLTLRESFDVGMNENNVEVAV 210
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 93.5 bits (222), Expect = 1e-19
Identities = 56/177 (31%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Frame = -3
Query: 625 KSVAKLQEERTV-RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEY 449
K+V KL ++ + K+ L D++ AG+TADA ILIN + S++ + + + +E
Sbjct: 50 KNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQ 109
Query: 448 ITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAK 269
+ + + KQ+YTQ G+RPFG+S L G+D L+Q++PSG Y WKA G + +
Sbjct: 110 LVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQ 169
Query: 268 TVREFLEKNYTADEVATENGAVKLAIRALLEV--VQSGQKNLEIAVMRRGQPMQMLD 104
L++ Y + + A +LAI+ L + V+ + +E+AV+ R +L+
Sbjct: 170 AAVTLLKQEYKSPNL---EEAKQLAIKVLWKTLDVKLASEKVEMAVLTRRDGKTVLE 223
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 93.1 bits (221), Expect = 1e-19
Identities = 53/171 (30%), Positives = 97/171 (56%), Gaps = 6/171 (3%)
Frame = -3
Query: 625 KSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYI 446
+S +KL + KI +D H+ + FAGL AD+R L+ RAQIE Q+ T + +E +
Sbjct: 53 RSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDV 112
Query: 445 TRYIAGLKQKY----TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGR 278
T+ +A L ++ +++ RPFG++ L G D +G+ LF +PSG + + KA + G
Sbjct: 113 TQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGA-KLFHLDPSGTFIDCKAKSIGA 171
Query: 277 SAKTVREFLEKNYTADEVATENGAVKLAIRALLEVVQS--GQKNLEIAVMR 131
++ + L++ Y D + + G +K+A+ L +V++ N+E+ V++
Sbjct: 172 ASDGAEQNLKEQY-HDALTIKEG-LKMALAILKQVMEEKLNSANVEVVVIK 220
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 87.4 bits (207), Expect = 7e-18
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Frame = -3
Query: 589 RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYT 410
+K+ +D H ++ AGL +D RIL Q EC S + + V ++ + + Q T
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANT 120
Query: 409 QSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTAD 230
Q GRRPFG+ LI G+D DG+ H+ QT+PS + G +++ R +LE+N
Sbjct: 121 QYYGRRPFGVGILIAGYDKDGA-HIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNF 179
Query: 229 EVATENGAVKLAIRALLEVVQSGQ----KNLEIAVMRRGQPMQMLD 104
E +T + A+ AL + + + + +N I ++ + P +L+
Sbjct: 180 EKSTPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLE 225
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 67.7 bits (158), Expect = 6e-12
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Frame = -3
Query: 595 TVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQK 416
TV + + V G+ DA+ I RAQ E S K + E + + +A L Q
Sbjct: 65 TVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQY 124
Query: 415 YTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYT 236
YTQ+ R G + L +D + P +++ +P+G Y K + G FLEK
Sbjct: 125 YTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIK 184
Query: 235 ADEVATENGAVKLAIRALLEV--VQSGQKNLEIAVMRR 128
T A++LAI AL + K+LE+ V+ +
Sbjct: 185 KKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTK 222
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Frame = -3
Query: 616 AKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRY 437
+KL + ++ ++D+V +A AG D L N A E +P+ ++ I
Sbjct: 56 SKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANS 115
Query: 436 IAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVRE 257
+A +T R PFG ++ LF EPSG+ YE+KA A G+ + +
Sbjct: 116 VAEYIHIHTLGISR-PFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKA 174
Query: 256 FLEKNYTADEVATENGAVKLAIRALLEV-VQSGQKNLEI 143
+EK E N VK A R ++ V ++ KN++I
Sbjct: 175 EIEK--LKIEELDVNQLVKEAARIIMVVRDENKDKNVQI 211
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/132 (20%), Positives = 55/132 (41%)
Frame = -3
Query: 598 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 419
R KI + D++V+ +G AD + + + A+ + +T PVT+ ++
Sbjct: 52 RATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLY 111
Query: 418 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 239
Y R S L+ G+D + ++ G ++ A+G + V+ FL+ +
Sbjct: 112 NY-----REQLSASVLVAGWDEELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQW 166
Query: 238 TADEVATENGAV 203
+ E A+
Sbjct: 167 RPNLTLEECKAI 178
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 472 EDPVTLEYITRY---IAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEP-SGIYY 305
++P+T E++TRY + Q +T SNGR+ + FD S TEP +G YY
Sbjct: 689 KNPITKEFVTRYTTEVHSKNQSFTDSNGRQ-----AMERFFDGATSFEYSDTEPIAGNYY 743
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = -3
Query: 598 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 419
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 418 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 248
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = -3
Query: 598 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 419
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 418 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 248
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -3
Query: 280 RSAKTVREFLEKNYTADEVATENGAVKLAIRA-LLEVVQSGQKNLEIAV 137
+ A L+K+ T D VA +N + K + A LL+V+QSG +NL+ V
Sbjct: 19 QGASDCSSLLKKHLTKDVVA-KNKSKKTRLGATLLDVIQSGGENLDSGV 66
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 277 SAKTVREFLEKNYTADEVATENGAVKL 197
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 277 SAKTVREFLEKNYTADEVATENGAVKL 197
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine
receptor, class z protein70 protein.
Length = 297
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 92 LVVSVKHLHWLTSSHYSNF*VLLARLY-YFQECSDSQLDSSILCSNFISGVIFL*KLSYC 268
L +VKH W+ + Y F L+ L+ + + S + ++F L C
Sbjct: 58 LYPTVKHFFWMVRTSYYFFIALIVVLFLQYPPLRNIIFYSLFIIDQTFELLLFSIALEKC 117
Query: 269 LCRSTSCISFPFIIYTRRFSLEQVW*TIIV 358
LC + P+ R L+++W IV
Sbjct: 118 LCTFFPKLE-PYFTSARNSLLDKIWALYIV 146
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 313 IYYEWKANATGRSAKTVREF----LEKNYTADEVATENGAVKLA 194
++Y K + GR K V + L K TA +V TENG VK A
Sbjct: 124 VWYINKKDKDGRKKKKVGDVISNGLPKTATASDVQTENGNVKKA 167
>Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical
protein T15D6.11 protein.
Length = 338
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 281 TSCISFPFIIYT--RRFSLEQVW*TIIVESSYQTRNT 385
+SCI F F++YT RF + VW T+ E YQ + T
Sbjct: 19 SSCIVFGFVLYTFAPRFHTKIVWDTLDGE-GYQFKET 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,561,657
Number of Sequences: 27780
Number of extensions: 291360
Number of successful extensions: 785
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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