Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_L05
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZD5 Cluster: Probable mitochondrial 28S ribosomal pr... 145 9e-34
UniRef50_UPI00015B50BF Cluster: PREDICTED: similar to ENSANGP000... 127 3e-28
UniRef50_UPI0000519AC7 Cluster: PREDICTED: similar to Probable m... 109 7e-23
UniRef50_Q0P459 Cluster: Zgc:153390; n=2; Danio rerio|Rep: Zgc:1... 72 1e-11
UniRef50_A7RWS6 Cluster: Predicted protein; n=1; Nematostella ve... 70 4e-11
UniRef50_Q5DBB1 Cluster: SJCHGC07338 protein; n=1; Schistosoma j... 58 2e-07
UniRef50_Q6G060 Cluster: 30S ribosomal protein S6; n=8; Alphapro... 46 0.001
UniRef50_A4RRW3 Cluster: Putative mitochondrial ribosomal protei... 44 0.004
UniRef50_A5CCY7 Cluster: 30S ribosomal protein S6; n=1; Orientia... 42 0.010
UniRef50_A7I006 Cluster: Ribosomal protein S6; n=1; Campylobacte... 42 0.013
UniRef50_Q89MW3 Cluster: 30S ribosomal protein S6; n=41; Alphapr... 41 0.022
UniRef50_Q5NFZ9 Cluster: 30S ribosomal protein S6; n=11; Francis... 40 0.052
UniRef50_P28778 Cluster: Mitochondrial 37S ribosomal protein MRP... 40 0.069
UniRef50_A2QR10 Cluster: Remark: component of the small subunit ... 38 0.16
UniRef50_A0CRZ2 Cluster: Chromosome undetermined scaffold_255, w... 38 0.21
UniRef50_A6DBN4 Cluster: 30S ribosomal protein S6; n=1; Caminiba... 38 0.28
UniRef50_Q0UD03 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_Q2H7Q0 Cluster: Putative uncharacterized protein; n=5; ... 36 0.84
UniRef50_P56013 Cluster: 30S ribosomal protein S6; n=5; Helicoba... 36 0.84
UniRef50_Q2QNJ6 Cluster: Ribosomal protein S6 containing protein... 36 1.1
UniRef50_A6M0V9 Cluster: Transcriptional regulator IclR-like pro... 35 2.0
UniRef50_Q6C7J8 Cluster: Yarrowia lipolytica chromosome E of str... 35 2.0
UniRef50_O66474 Cluster: 30S ribosomal protein S6; n=1; Aquifex ... 35 2.0
UniRef50_Q8VY91 Cluster: 30S ribosomal protein S6 alpha, chlorop... 35 2.0
UniRef50_A1CPR5 Cluster: 37S ribosomal protein Mrp17; n=6; Eurot... 34 2.6
UniRef50_Q4A805 Cluster: Putative uncharacterized protein; n=3; ... 34 3.4
UniRef50_A6PMD3 Cluster: Ribosomal protein S6; n=1; Victivallis ... 34 3.4
UniRef50_Q7QVE4 Cluster: GLP_542_6882_5644; n=1; Giardia lamblia... 34 3.4
UniRef50_Q97YE3 Cluster: Putative uncharacterized protein; n=2; ... 33 4.5
UniRef50_Q8IJI8 Cluster: RNA helicase, putative; n=1; Plasmodium... 33 6.0
>UniRef50_Q9VZD5 Cluster: Probable mitochondrial 28S ribosomal
protein S6; n=6; Endopterygota|Rep: Probable
mitochondrial 28S ribosomal protein S6 - Drosophila
melanogaster (Fruit fly)
Length = 147
Score = 145 bits (351), Expect = 9e-34
Identities = 70/150 (46%), Positives = 99/150 (66%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 307
MP+YELAL+LR +P+PEL + ++R + +I D GGIIR +ENLG R +P+K + HG+ H+E
Sbjct: 1 MPSYELALVLRQLPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHRE 60
Query: 306 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTXXXXXLPPAXREDVQ 127
+F DT + DLKEE+ RD+DI+R+ FKV+E E+K CT LPPA R+DVQ
Sbjct: 61 GTHFTIAFDTAPTKIADLKEEFGRDIDIIRRYIFKVEEPEQKPCTLHEEMLPPAYRKDVQ 120
Query: 126 KMIQXGNTQVKRLTEKXXENAG*DDEPXQK 37
++I K+ +K N+G D P QK
Sbjct: 121 EIIAAAQ---KKQKKKFNYNSGLDYYPFQK 147
>UniRef50_UPI00015B50BF Cluster: PREDICTED: similar to
ENSANGP00000026583; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000026583 - Nasonia
vitripennis
Length = 153
Score = 127 bits (306), Expect = 3e-28
Identities = 68/153 (44%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 307
MP YE+ LLL+ M +PEL +LKR + +IF GG IR I+NLG PY+ +A+ THKE
Sbjct: 1 MPAYEMPLLLKIMTRPELVVTLKRTAESIFKKGGFIRKIDNLGKLATPYRMSANNETHKE 60
Query: 306 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTXXXXXLPPAXREDVQ 127
ANYFI D P + L EE +RD+DIV+ + + E+++ CT LPPA R VQ
Sbjct: 61 ANYFIIHFDLPPSKLATLNEECQRDIDIVKCKIYNKNEDKKIECTLHEELLPPAYRPQVQ 120
Query: 126 KMIQXG-NTQVK--RLTEKXXENAG*DDEPXQK 37
KM+ G Q K +L K N G D P Q+
Sbjct: 121 KMLAIGAKQQAKKDKLKHKFKFNTGLDYYPFQR 153
>UniRef50_UPI0000519AC7 Cluster: PREDICTED: similar to Probable
mitochondrial 28S ribosomal protein S6 (MRP-S6); n=1;
Apis mellifera|Rep: PREDICTED: similar to Probable
mitochondrial 28S ribosomal protein S6 (MRP-S6) - Apis
mellifera
Length = 150
Score = 109 bits (261), Expect = 7e-23
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 307
MPTYE+ LLLR K E +LK I+ +IF+ GG IR IEN G + +P K+ AH H
Sbjct: 1 MPTYEMPLLLRLANKTEYVNTLKDIAKSIFETGGFIRKIENWGIKELPCKTNAHNSIHTH 60
Query: 306 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQR-FFKVKEEERKACTXXXXXLPPAXREDV 130
AN+F+F D+P V+ ++++ +R+ I+R R + + E CT LPPA R V
Sbjct: 61 ANHFMFSFDSPPSQVVKIQDDCRRNRSIIRVRIYLENVVPENVKCTFAEEMLPPAYRPSV 120
Query: 129 QKMIQXGNTQVKRLTEKXXENAG*DDEPXQK 37
QK+++ KR K N+G D P +
Sbjct: 121 QKLLEQAKKH-KRYQSKFKYNSGLDYYPFMR 150
>UniRef50_Q0P459 Cluster: Zgc:153390; n=2; Danio rerio|Rep:
Zgc:153390 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 118
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/99 (34%), Positives = 50/99 (50%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 307
MP YEL ++L+ M +PE L+R +F+ G ++R++ENLG R +PYK + H
Sbjct: 1 MPRYELYMVLKAMQRPETAAVLRRTVETLFERGAVVRSLENLGERKLPYKISKHDSRQSH 60
Query: 306 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEE 190
YF V L +RDVD++R K E
Sbjct: 61 GGYFSIDFHASPNIVSGLLNHLERDVDVLRPTVVKKDTE 99
>UniRef50_A7RWS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 119
Score = 70.1 bits (164), Expect = 4e-11
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 307
MP YEL ++ R + K L++ +I GG++R IENLG + +PY+ AH H +
Sbjct: 1 MPRYELIMIARVLTKEGFSNILRQTCQSIISKGGVVRKIENLGQQQLPYRMRAHAEWHTQ 60
Query: 306 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVK 196
YF+ +D + LK E K + DI+R K++
Sbjct: 61 GRYFLLDMDMNADHLELLKNELKMEPDIIRPSVVKLQ 97
>UniRef50_Q5DBB1 Cluster: SJCHGC07338 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07338 protein - Schistosoma
japonicum (Blood fluke)
Length = 135
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/90 (28%), Positives = 49/90 (54%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 307
M YE++L+++ + P +K +LKR + D G + N+ENLG R +P G E
Sbjct: 1 MIRYEMSLIIKALGTPGIKAALKRHLKGMLDSGAHLFNVENLGLRRLPNVFHVQGERQYE 60
Query: 306 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVR 217
+YF+ + P ++ +++ +D DI++
Sbjct: 61 GHYFLINFNAPHDSLNQMRKMANKDSDIIK 90
>UniRef50_Q6G060 Cluster: 30S ribosomal protein S6; n=8;
Alphaproteobacteria|Rep: 30S ribosomal protein S6 -
Bartonella quintana (Rochalimaea quintana)
Length = 136
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDC-GGIIRNIENLGFRPMPYKSTAHGMTHK 310
M YE L R P+ L + ++ + GG + +EN G RP+ Y+ ++
Sbjct: 1 MALYEHIFLARQDIAPQQVDELLSLYKSVIEAHGGKVGRVENWGLRPLAYRI----RKNR 56
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERK 181
+A Y + ID P A+ +++ + + DI+R +V++ E++
Sbjct: 57 KAYYVLINIDAPATAIAEVERQMHINEDILRYMTVRVEKHEKE 99
>UniRef50_A4RRW3 Cluster: Putative mitochondrial ribosomal protein
S6; n=1; Ostreococcus lucimarinus CCE9901|Rep: Putative
mitochondrial ribosomal protein S6 - Ostreococcus
lucimarinus CCE9901
Length = 126
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = -2
Query: 486 MPTYELALLLR-NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHK 310
M Y+ +++ +PK L+R+ ++ D GG++ N+ + G R + Y+ G H
Sbjct: 1 MVLYDAMIVVSAKVPKTACADVLRRLGASVMDAGGVVTNVASYGARTLAYEFRRPGEKHF 60
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVR 217
EA + + P V + + + D ++R
Sbjct: 61 EAQFVKMSFNAPPTLVAEAERTLRIDERVLR 91
>UniRef50_A5CCY7 Cluster: 30S ribosomal protein S6; n=1; Orientia
tsutsugamushi Boryong|Rep: 30S ribosomal protein S6 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 118
Score = 42.3 bits (95), Expect = 0.010
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = -2
Query: 486 MPTYELALLLR-NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHK 310
M YEL L++R + E+ ++ I + G + E G R + YK + +
Sbjct: 1 MRLYELVLIVRPELSSTEIDKLTDELTSIISNYEGKLVKHEYWGMRSLAYKINRN----Q 56
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKE 193
A+Y + I + LK + K +++I+R RF KVKE
Sbjct: 57 RAHYIMLAISANNNILQKLKNKIKNNLEIIRSRFIKVKE 95
>UniRef50_A7I006 Cluster: Ribosomal protein S6; n=1; Campylobacter
hominis ATCC BAA-381|Rep: Ribosomal protein S6 -
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 /
NCTC 13146 /CH001A)
Length = 145
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = -2
Query: 486 MPTYELALLLR-NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHK 310
M YE+ +++ + E+KT + + I GG I + +G R + YK + +
Sbjct: 1 MKHYEVLFIVKPTLQDDEVKTKVDFVKEVITKNGGEIAAVVEMGTRKLAYKIDKY----E 56
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERK 181
YF+ PTK + +L + + DI+ RF +K E +K
Sbjct: 57 RGVYFVIYFTAPTKLIAELVRNLRINEDII--RFLTIKYENKK 97
>UniRef50_Q89MW3 Cluster: 30S ribosomal protein S6; n=41;
Alphaproteobacteria|Rep: 30S ribosomal protein S6 -
Bradyrhizobium japonicum
Length = 166
Score = 41.1 bits (92), Expect = 0.022
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLK-RISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHK 310
M YE L R P+ L +++ + GG + EN G R + Y+ + +
Sbjct: 1 MALYEHVFLARQDASPQQVEELTAQMTGIVEGLGGKVTKTENWGVRSLTYRMNKN----R 56
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEE 187
+A++ + ID P+ A+ +++ + + D++R +V+E E
Sbjct: 57 KAHFVLLNIDAPSAAIAEIERQERISEDVIRYLSVRVEELE 97
>UniRef50_Q5NFZ9 Cluster: 30S ribosomal protein S6; n=11;
Francisella tularensis|Rep: 30S ribosomal protein S6 -
Francisella tularensis subsp. tularensis
Length = 111
Score = 39.9 bits (89), Expect = 0.052
Identities = 28/98 (28%), Positives = 47/98 (47%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 307
M YE+ L++ +L L + I + GG I E+ G R + Y HK
Sbjct: 1 MKHYEVVLMIHPDQSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEK---LHK- 56
Query: 306 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKE 193
A+Y +F I+ PT+++ L+E + + I+R+ KE
Sbjct: 57 AHYVLFNIECPTESLEKLQESLRYNDAILRRLVIATKE 94
>UniRef50_P28778 Cluster: Mitochondrial 37S ribosomal protein MRP17;
n=7; Saccharomycetales|Rep: Mitochondrial 37S ribosomal
protein MRP17 - Saccharomyces cerevisiae (Baker's yeast)
Length = 131
Score = 39.5 bits (88), Expect = 0.069
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = -2
Query: 477 YELALLLR----NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHK 310
YEL L+R N PK E K I I G++R+I +G R +P H
Sbjct: 3 YELIGLVRITNSNAPKLEAKELSSTIGKLIIQNRGVVRDIVPMGIRYLPKIMKKDQEKHF 62
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKV 199
A +F+ D+ ++ K+D ++R KV
Sbjct: 63 RAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKV 99
>UniRef50_A2QR10 Cluster: Remark: component of the small subunit of
mitochondrial ribosome; n=7; Pezizomycotina|Rep: Remark:
component of the small subunit of mitochondrial ribosome
- Aspergillus niger
Length = 121
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -2
Query: 477 YELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEANY 298
YEL ++R E++ + + GG++R N G +P +T H ++E ++
Sbjct: 3 YELIAVVRPGSLQEVRDIARNAGIQVLRSGGVVRGFTNWGTFRLPRPTTKHQARYREGHH 62
Query: 297 FIFKIDT--PTKAVI 259
FI + D P +A +
Sbjct: 63 FIMRFDASGPVQAAV 77
>UniRef50_A0CRZ2 Cluster: Chromosome undetermined scaffold_255,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_255,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 143
Score = 37.9 bits (84), Expect = 0.21
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = -2
Query: 486 MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAH-GMTHK 310
MP YEL + R +++++S IF GG IRN+ LG R M + + G H
Sbjct: 1 MPLYELIAICRCSQAQGTAAAIRQLSVTIFQGGGNIRNVRILGDRIMSKQIIGNDGFRHL 60
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKE 193
Y D ++ + + +I R + ++VK+
Sbjct: 61 IGRYVSVLYDGHPSKFREVLKGGDKSFEIFRLQHYRVKD 99
>UniRef50_A6DBN4 Cluster: 30S ribosomal protein S6; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S6 - Caminibacter mediatlanticus TB-2
Length = 111
Score = 37.5 bits (83), Expect = 0.28
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = -2
Query: 477 YELALLLR-NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEAN 301
YE ++++ + E + + I I D G + ++N+G R + Y H
Sbjct: 6 YETMVIVKPTLTDEEKEAIIDNIKKVISDFKGEVVAVDNIGVRELAYPIEKFERGH---- 61
Query: 300 YFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERK 181
Y+I P +AVI+L+ + + + +++ RF VK E +K
Sbjct: 62 YYIIYYKAPAEAVIELERQLRYNEEVL--RFMTVKYETKK 99
>UniRef50_Q0UD03 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 112
Score = 36.7 bits (81), Expect = 0.48
Identities = 23/96 (23%), Positives = 41/96 (42%)
Frame = -2
Query: 477 YELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEANY 298
YE+ ++R E+K K + I G++R N G +P + TH ++
Sbjct: 3 YEMIGVVRPGRLSEVKEIAKTAGNIILSQQGVVRGYSNWGTFLLPKPAKKLQSTHHYGHH 62
Query: 297 FIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEE 190
FI + D +A L+ D ++R K+ E+
Sbjct: 63 FIMRFDASARAQHALRRTMSLDPRLIRYSVVKMGEK 98
>UniRef50_Q2H7Q0 Cluster: Putative uncharacterized protein; n=5;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1375
Score = 35.9 bits (79), Expect = 0.84
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = -2
Query: 477 YELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEANY 298
YE+ ++R E+K + I GG+IR++ N G +P + + H +Y
Sbjct: 1263 YEMIGIVRPGNLKEVKEIVLTAGQLILRQGGVIRDVANWGVFHLPRAVSLNQTRHVRGHY 1322
Query: 297 FIFKIDTPTKAVIDLKEEYKRDVDIVR 217
F+ + D D+ + D ++R
Sbjct: 1323 FVLRYDAGVATHQDVARTLRVDPRVIR 1349
>UniRef50_P56013 Cluster: 30S ribosomal protein S6; n=5;
Helicobacteraceae|Rep: 30S ribosomal protein S6 -
Helicobacter pylori (Campylobacter pylori)
Length = 142
Score = 35.9 bits (79), Expect = 0.84
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = -2
Query: 486 MPTYELALLLR-NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHK 310
M YE +L+ + + E+K+ ++ I G+I ++G R + Y+ HK
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEI----KKHK 56
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERK 181
Y++ +++L+ Y+ + D++ RF +K E +K
Sbjct: 57 RGYYYVAYFKAEPSMIVELERLYRINEDVL--RFIVIKYESKK 97
>UniRef50_Q2QNJ6 Cluster: Ribosomal protein S6 containing protein,
expressed; n=6; Oryza sativa|Rep: Ribosomal protein S6
containing protein, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 317
Score = 35.5 bits (78), Expect = 1.1
Identities = 24/106 (22%), Positives = 44/106 (41%)
Frame = -2
Query: 489 KMPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHK 310
+M YE+ L+ E++ + ++ + + G I + N G R + YK +
Sbjct: 128 RMRHYEVVYLIHEDRVEEVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKA----R 183
Query: 309 EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACT 172
ANY + + K + D K +D I+R K E + C+
Sbjct: 184 HANYILMNFEIQAKYINDFKTLLDKDERIIRHLVMKRDEAITEDCS 229
>UniRef50_A6M0V9 Cluster: Transcriptional regulator IclR-like
protein; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator IclR-like protein -
Clostridium beijerinckii NCIMB 8052
Length = 255
Score = 34.7 bits (76), Expect = 2.0
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = -2
Query: 387 GIIRNIENLGFRPMPYKSTAHGM----THKEA---NYFIFKIDTP-TKAVIDLKEEYKRD 232
G +R NLG R Y ST+ G T+ A NYF I P TK I KE +
Sbjct: 119 GTLRTTGNLGSRTSMY-STSLGKAILATYNSAQLNNYFEQIIFIPKTKGTITNKESLMEN 177
Query: 231 VDIVRQRFFKVKEEERK 181
+D++R+R + + +EE +
Sbjct: 178 LDLIRERGYSISDEENE 194
>UniRef50_Q6C7J8 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 99
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/81 (24%), Positives = 37/81 (45%)
Frame = -2
Query: 432 KTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEANYFIFKIDTPTKAVIDL 253
K ++ +I I G++R IE F+P+P A ++ +YF K D A ++
Sbjct: 19 KQAVTQIGRMIIGNRGVVRLIECWRFKPLPQIMKAQQKSYVVGDYFYMKFDCSPGAQGEI 78
Query: 252 KEEYKRDVDIVRQRFFKVKEE 190
+ D ++R K+ E+
Sbjct: 79 MRAVQADPRLIRTFCVKLNEK 99
>UniRef50_O66474 Cluster: 30S ribosomal protein S6; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S6 - Aquifex
aeolicus
Length = 110
Score = 34.7 bits (76), Expect = 2.0
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = -2
Query: 477 YELALLLR-NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEAN 301
YE ++ + + E+K +++ I GG I E+ G R + Y A
Sbjct: 10 YETVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPI----QKFNNAR 65
Query: 300 YFI--FKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERK 181
YF+ FK + P + +L + K D D++R F++KE E K
Sbjct: 66 YFLVQFKTENP-QLPNELDFQLKIDEDVIRWLNFQIKESEVK 106
>UniRef50_Q8VY91 Cluster: 30S ribosomal protein S6 alpha,
chloroplast precursor; n=2; core eudicotyledons|Rep: 30S
ribosomal protein S6 alpha, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 207
Score = 34.7 bits (76), Expect = 2.0
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Frame = -2
Query: 477 YELALLLR-NMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPY---KSTAHGMTHK 310
YE +LR +M + E ++ + GG+ + N G P+ Y K G T+
Sbjct: 103 YETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNT 162
Query: 309 --EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEE 187
+ Y +F T ++++ L+ D DI+R FK+K+ +
Sbjct: 163 YLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKKRK 205
>UniRef50_A1CPR5 Cluster: 37S ribosomal protein Mrp17; n=6;
Eurotiomycetidae|Rep: 37S ribosomal protein Mrp17 -
Aspergillus clavatus
Length = 163
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = -2
Query: 477 YELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEANY 298
YEL ++R E++ + + GG++R N G +P +T H + + ++
Sbjct: 45 YELIAVVRPGSLNEVREIARNAGIQVLRSGGVVRGYTNWGTFRLPKPTTKHQARYTDGHH 104
Query: 297 FIFKID 280
FI + D
Sbjct: 105 FIMRFD 110
>UniRef50_Q4A805 Cluster: Putative uncharacterized protein; n=3;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 7448)
Length = 158
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = -2
Query: 594 MTTENTAKTPNSKFTQFEINTSKFVFQTLYVIIRIKMPTYELALLLRNMPKPELKTS 424
+T + + P +KF + +N K VFQ VI + Y L L ++N + ELKTS
Sbjct: 38 ITISHGVRNPGTKFFDYGVNWRK-VFQEFDVIRGYDISKYNLDLTVKNDQQVELKTS 93
>UniRef50_A6PMD3 Cluster: Ribosomal protein S6; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S6 -
Victivallis vadensis ATCC BAA-548
Length = 109
Score = 33.9 bits (74), Expect = 3.4
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = -2
Query: 420 KRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEANYFIFKIDTPTKAVIDLKEEY 241
K S I GG + + +G R Y+ K YF F + T V D+KE+Y
Sbjct: 24 KEFSELIASLGGTLESTTPMGRRQFTYEIDKR----KAGIYFDFVFELETAKVKDIKEKY 79
Query: 240 KRDVDIVR 217
K D I+R
Sbjct: 80 KLDERILR 87
>UniRef50_Q7QVE4 Cluster: GLP_542_6882_5644; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_542_6882_5644 - Giardia lamblia ATCC
50803
Length = 412
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -2
Query: 372 IENLGFRPMPYKSTAHGMTHKEANYFIFKIDTPTKAVIDLKEEYKRDVDI-VRQRFFKVK 196
+ENLG+ P+P H M+ A Y + DTP D KEE+ R++ F +
Sbjct: 136 VENLGWDPIPLTDRIHLMS---AGYLVGDKDTPIIVDGDGKEEFLREMLFNTNFEFCSSR 192
Query: 195 EEERKACTXXXXXLPPAXRED 133
E E PP E+
Sbjct: 193 EREEGCKNVLIIDFPPGSSEE 213
>UniRef50_Q97YE3 Cluster: Putative uncharacterized protein; n=2;
Sulfolobus|Rep: Putative uncharacterized protein -
Sulfolobus solfataricus
Length = 177
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = -2
Query: 387 GIIRNIENLGFRPMPYKSTA----HGMTHKEANYFIFKIDTPTKAVIDLKEEYKRDVDIV 220
GI R++ENLGF+ + +TA H + + I + ++A+I +K K +V+IV
Sbjct: 95 GIARDLENLGFKGLVNLTTAMLGIHRYAYNGLDEDISPFHSRSEAIISIKGLIKAEVEIV 154
Query: 219 RQRFFKVKEEE 187
F +E+E
Sbjct: 155 GSMKFGDEEKE 165
>UniRef50_Q8IJI8 Cluster: RNA helicase, putative; n=1; Plasmodium
falciparum 3D7|Rep: RNA helicase, putative - Plasmodium
falciparum (isolate 3D7)
Length = 680
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -2
Query: 381 IRNIENLGFRPMPYKSTAHGMTHKEANYFIFKIDTPT---KAVIDLKEEYKRDVDIVRQR 211
+ NI L PY S + +KE + KIDT T K +I KE+ KR D +
Sbjct: 122 MNNINKLNHNMKPYNSDSDNQNNKEKDMEKNKIDTLTNEQKEIISNKEKEKRKNDKSNNK 181
Query: 210 FFKVKEEERK 181
+ + +E K
Sbjct: 182 TYIINKEYEK 191
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,133,927
Number of Sequences: 1657284
Number of extensions: 10448005
Number of successful extensions: 25284
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25273
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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