Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_L01
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    27   0.11 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   3.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.5  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 585 SNTGIHLKSAEPPPGTIPSSTAALVALRASLTL 683
           S++G+   +A PPP T  S + A VA  AS  L
Sbjct: 23  SSSGMTSPAAAPPPATTSSGSPASVASNASAPL 55


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 526 ELSLQSLHQWPDH 564
           E+ LQ LHQ+P H
Sbjct: 124 EVKLQHLHQFPHH 136


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 342 LASVRAVRTTFVGSMMPF 395
           +AS R  R TF+ S +PF
Sbjct: 180 MASTRYARQTFIFSAIPF 197


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 428 IIPKFISKILHLSNNNRTINACIFCYCHA 514
           I+   +  I ++   N T+N  +F +C A
Sbjct: 67  IVGCILKHIFNILMKNVTLNDVVFIFCSA 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,117
Number of Sequences: 336
Number of extensions: 3256
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)