Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_K22
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640713-1|CAE45832.1| 621|Homo sapiens hypothetical protein pr... 38 0.027
BC125077-1|AAI25078.1| 580|Homo sapiens PHD finger protein 19 p... 38 0.027
BC125076-1|AAI25077.1| 580|Homo sapiens PHD finger protein 19 p... 38 0.027
AL354792-3|CAI15692.1| 580|Homo sapiens PHD finger protein 19 p... 38 0.027
AL161911-1|CAI95112.1| 580|Homo sapiens PHD finger protein 19 p... 38 0.027
AL117477-1|CAB55950.1| 473|Homo sapiens hypothetical protein pr... 38 0.027
BC010013-1|AAH10013.1| 536|Homo sapiens MTF2 protein protein. 36 0.082
AL117354-5|CAI23503.1| 536|Homo sapiens metal response element ... 36 0.082
AL117354-4|CAI23502.1| 593|Homo sapiens metal response element ... 36 0.082
AJ010014-1|CAA08970.1| 593|Homo sapiens M96A protein protein. 36 0.082
AF073293-1|AAC27080.1| 262|Homo sapiens M962 protein spliced is... 36 0.082
AF072814-1|AAC27618.1| 491|Homo sapiens PHD finger DNA binding ... 36 0.082
AY358225-1|AAQ88592.1| 119|Homo sapiens GRTR3118 protein. 33 1.0
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 30 7.1
>BX640713-1|CAE45832.1| 621|Homo sapiens hypothetical protein
protein.
Length = 621
Score = 37.9 bits (84), Expect = 0.027
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -2
Query: 466 LSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNT 344
LS LKSS+ +YF A + ++VLARR+ P YL+EW+ T
Sbjct: 573 LSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTT 619
>BC125077-1|AAI25078.1| 580|Homo sapiens PHD finger protein 19
protein.
Length = 580
Score = 37.9 bits (84), Expect = 0.027
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -2
Query: 466 LSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNT 344
LS LKSS+ +YF A + ++VLARR+ P YL+EW+ T
Sbjct: 532 LSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTT 578
>BC125076-1|AAI25077.1| 580|Homo sapiens PHD finger protein 19
protein.
Length = 580
Score = 37.9 bits (84), Expect = 0.027
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -2
Query: 466 LSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNT 344
LS LKSS+ +YF A + ++VLARR+ P YL+EW+ T
Sbjct: 532 LSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTT 578
>AL354792-3|CAI15692.1| 580|Homo sapiens PHD finger protein 19
protein.
Length = 580
Score = 37.9 bits (84), Expect = 0.027
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -2
Query: 466 LSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNT 344
LS LKSS+ +YF A + ++VLARR+ P YL+EW+ T
Sbjct: 532 LSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTT 578
>AL161911-1|CAI95112.1| 580|Homo sapiens PHD finger protein 19
protein.
Length = 580
Score = 37.9 bits (84), Expect = 0.027
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -2
Query: 466 LSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNT 344
LS LKSS+ +YF A + ++VLARR+ P YL+EW+ T
Sbjct: 532 LSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTT 578
>AL117477-1|CAB55950.1| 473|Homo sapiens hypothetical protein
protein.
Length = 473
Score = 37.9 bits (84), Expect = 0.027
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -2
Query: 466 LSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNT 344
LS LKSS+ +YF A + ++VLARR+ P YL+EW+ T
Sbjct: 425 LSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTT 471
>BC010013-1|AAH10013.1| 536|Homo sapiens MTF2 protein protein.
Length = 536
Score = 36.3 bits (80), Expect = 0.082
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = -2
Query: 469 QLSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNTS 341
QL+ LK+S+ SYF A + +RVLARR+ YL+EW+ T+
Sbjct: 487 QLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATA 535
>AL117354-5|CAI23503.1| 536|Homo sapiens metal response element
binding transcription factor 2 protein.
Length = 536
Score = 36.3 bits (80), Expect = 0.082
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = -2
Query: 469 QLSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNTS 341
QL+ LK+S+ SYF A + +RVLARR+ YL+EW+ T+
Sbjct: 487 QLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATA 535
>AL117354-4|CAI23502.1| 593|Homo sapiens metal response element
binding transcription factor 2 protein.
Length = 593
Score = 36.3 bits (80), Expect = 0.082
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = -2
Query: 469 QLSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNTS 341
QL+ LK+S+ SYF A + +RVLARR+ YL+EW+ T+
Sbjct: 544 QLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATA 592
>AJ010014-1|CAA08970.1| 593|Homo sapiens M96A protein protein.
Length = 593
Score = 36.3 bits (80), Expect = 0.082
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = -2
Query: 469 QLSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNTS 341
QL+ LK+S+ SYF A + +RVLARR+ YL+EW+ T+
Sbjct: 544 QLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATA 592
>AF073293-1|AAC27080.1| 262|Homo sapiens M962 protein spliced
isoform 2 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.082
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = -2
Query: 469 QLSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNTS 341
QL+ LK+S+ SYF A + +RVLARR+ YL+EW+ T+
Sbjct: 213 QLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATA 261
>AF072814-1|AAC27618.1| 491|Homo sapiens PHD finger DNA binding
protein isoform 1 protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.082
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = -2
Query: 469 QLSALKSSVQSYFRAE------QTFRVLARRLCPGAPPAYLIEWDSNTS 341
QL+ LK+S+ SYF A + +RVLARR+ YL+EW+ T+
Sbjct: 442 QLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATA 490
>AY358225-1|AAQ88592.1| 119|Homo sapiens GRTR3118 protein.
Length = 119
Score = 32.7 bits (71), Expect = 1.0
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 435 TSAQSRLSVYWPDDSVRARLLPTSLNGTPTHHKT--IIYKYIYVAQLIVCLL 286
TS L+ WP DS+ ARL+ ++ PT + II K + QL+VCLL
Sbjct: 20 TSMCCLLASVWPVDSLMARLILINICWVPTMAQALEIIVKSSPLPQLLVCLL 71
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 29.9 bits (64), Expect = 7.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 432 SAQSRLSVYWPDDSVRARLLPTSLNGTPTHHKTIIYKYIYVAQLIVCLL 286
SA + +++ DDS++ + LP+ L G +K + V Q +V LL
Sbjct: 3294 SAATGVNLTTVDDSIQRKFLPSFLRGIAEENKLVTSPNFVVTQALVALL 3342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,013,333
Number of Sequences: 237096
Number of extensions: 1454142
Number of successful extensions: 3220
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3213
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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