BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_K17
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457312-1|CAG33593.1| 318|Homo sapiens FLJ13352 protein. 83 1e-15
BC002480-1|AAH02480.1| 318|Homo sapiens steroid 5 alpha-reducta... 83 1e-15
AK023414-1|BAB14568.1| 318|Homo sapiens protein ( Homo sapiens ... 83 1e-15
M74047-1|AAA60586.1| 254|Homo sapiens steroid 5-alpha-reductase... 44 5e-04
EF560740-1|ABQ59050.1| 254|Homo sapiens SRD5A2 protein protein. 44 5e-04
BC113641-1|AAI13642.1| 254|Homo sapiens steroid-5-alpha-reducta... 44 5e-04
BC112252-1|AAI12253.1| 254|Homo sapiens steroid-5-alpha-reducta... 44 5e-04
AY884245-1|AAW56942.1| 254|Homo sapiens steroid-5-alpha-reducta... 44 5e-04
M68886-1|AAA60995.1| 259|Homo sapiens steroid 5-alpha-reductase... 39 0.019
M32313-1|AAA35490.1| 259|Homo sapiens protein ( Human steroid 5... 39 0.019
BT006834-1|AAP35480.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.019
BC008673-1|AAH08673.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.019
BC007033-1|AAH07033.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.019
AY341029-1|AAP88935.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.019
AF113128-1|AAF14869.1| 211|Homo sapiens steroid-5-alpha-reducta... 39 0.019
AF052126-1|AAC28620.1| 259|Homo sapiens steroid 5-alpha-reducta... 39 0.019
AK126819-1|BAC86707.1| 126|Homo sapiens protein ( Homo sapiens ... 34 0.55
AC064824-1|AAY40904.1| 187|Homo sapiens unknown protein. 30 8.9
>CR457312-1|CAG33593.1| 318|Homo sapiens FLJ13352 protein.
Length = 318
Score = 82.6 bits (195), Expect = 1e-15
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Frame = -2
Query: 629 LRRLYETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTK 450
LRRL+E Y+ VF+ + +++ Y G+++Y + + Q P+ G + +
Sbjct: 141 LRRLFECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQ 198
Query: 449 TTILFVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRM 270
+ ++F+W QY+ ++I LRK+K + ++ +HR+P G F+YVSSP+ +
Sbjct: 199 ARWFHILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYL 257
Query: 269 CEIIMYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
E+++Y + F T+ + V NQ + +H++YK F +YP R A P++
Sbjct: 258 AELMIYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317
>BC002480-1|AAH02480.1| 318|Homo sapiens steroid 5 alpha-reductase
2-like protein.
Length = 318
Score = 82.6 bits (195), Expect = 1e-15
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Frame = -2
Query: 629 LRRLYETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTK 450
LRRL+E Y+ VF+ + +++ Y G+++Y + + Q P+ G + +
Sbjct: 141 LRRLFECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQ 198
Query: 449 TTILFVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRM 270
+ ++F+W QY+ ++I LRK+K + ++ +HR+P G F+YVSSP+ +
Sbjct: 199 ARWFHILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYL 257
Query: 269 CEIIMYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
E+++Y + F T+ + V NQ + +H++YK F +YP R A P++
Sbjct: 258 AELMIYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317
>AK023414-1|BAB14568.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ13352 fis, clone OVARC1002165, weakly similar to
3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 2 (EC 1.3.99.5).
).
Length = 318
Score = 82.6 bits (195), Expect = 1e-15
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Frame = -2
Query: 629 LRRLYETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTK 450
LRRL+E Y+ VF+ + +++ Y G+++Y + + Q P+ G + +
Sbjct: 141 LRRLFECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQ 198
Query: 449 TTILFVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRM 270
+ ++F+W QY+ ++I LRK+K + ++ +HR+P G F+YVSSP+ +
Sbjct: 199 ARWFHILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYL 257
Query: 269 CEIIMYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
E+++Y + F T+ + V NQ + +H++YK F +YP R A P++
Sbjct: 258 AELMIYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317
>M74047-1|AAA60586.1| 254|Homo sapiens steroid 5-alpha-reductase 2
protein.
Length = 254
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = -2
Query: 365 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 195
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 194 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>EF560740-1|ABQ59050.1| 254|Homo sapiens SRD5A2 protein protein.
Length = 254
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = -2
Query: 365 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 195
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 194 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>BC113641-1|AAI13642.1| 254|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 254
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = -2
Query: 365 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 195
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 194 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>BC112252-1|AAI12253.1| 254|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 254
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = -2
Query: 365 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 195
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 194 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>AY884245-1|AAW56942.1| 254|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 254
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = -2
Query: 365 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 195
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 194 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>M68886-1|AAA60995.1| 259|Homo sapiens steroid 5-alpha-reductase
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>M32313-1|AAA35490.1| 259|Homo sapiens protein ( Human steroid
5-alpha-reductase mRNA, complete cds. ).
Length = 259
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>BT006834-1|AAP35480.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>BC008673-1|AAH08673.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>BC007033-1|AAH07033.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>AY341029-1|AAP88935.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>AF113128-1|AAF14869.1| 211|Homo sapiens steroid-5-alpha-reductase
isoform protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 135 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 191
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 192 YLRKFEEYPKFRKIIIPFL 210
>AF052126-1|AAC28620.1| 259|Homo sapiens steroid 5-alpha-reductase
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.019
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 323 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 153
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 152 YKKTFKNYPAKRTAVFPYV 96
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>AK126819-1|BAC86707.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ44871 fis, clone BRAMY2021098. ).
Length = 126
Score = 33.9 bits (74), Expect = 0.55
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 33 QILFHKFA-EKMHVCNLVFTLQYIREDCSSLRWIVLECFLIPFMGMDACL 179
Q +FH + E++H+ + + L +++E LR LEC L +G D CL
Sbjct: 74 QTIFHLYLMERLHISHSTYILSWMQEMQEPLRLSHLECSLERNLGSDKCL 123
>AC064824-1|AAY40904.1| 187|Homo sapiens unknown protein.
Length = 187
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -2
Query: 629 LRRLYETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPL 498
LRRL+E Y+ VF+ + +++ Y G+++Y + + Q P+
Sbjct: 141 LRRLFECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPM 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,221,655
Number of Sequences: 237096
Number of extensions: 2217982
Number of successful extensions: 7541
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7518
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -