Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_K17
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical p...    84   1e-16
Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical p...    84   1e-16
Z68116-2|CAA92173.1|  243|Caenorhabditis elegans Hypothetical pr...    49   4e-06
Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z68222-3|CAA92499.1|  253|Caenorhabditis elegans Hypothetical pr...    42   5e-04
AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha...    36   0.036
Z78413-1|CAB01663.1|  727|Caenorhabditis elegans Hypothetical pr...    33   0.25 
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U88184-3|AAK31519.1|  648|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U88309-1|AAB42331.3|  395|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z83216-8|CAB05677.1|  261|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.13b protein.
          Length = 342

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
 Frame = -2

Query: 626 RRLYETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKT 447
           RRLYET ++ V++  S+MN+ HY  GI+HY    +  + +         +  V+ ID  +
Sbjct: 168 RRLYETIFVSVYS-DSRMNLFHYAVGIVHYIILPISIMCETQGVASKLPQLHVS-IDDIS 225

Query: 446 TILFVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMC 267
              +    L ++ C ++Q+Q     A  RK  +   I    + +  G  F  VS PH + 
Sbjct: 226 LTQWAGAVLFWI-CNWKQHQLAEQIANTRKGPRG-LIRNYAYGICFGGWFNLVSCPHFLF 283

Query: 266 EIIMYTVLVFLITTKTFVC--IYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYVL 93
           EI +Y  L FL+    +V   I ++V  NQ    +  H WY KTF  YP  R A+ PYVL
Sbjct: 284 EICIYLSL-FLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKSRKALIPYVL 342


>Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical
           protein B0024.13a protein.
          Length = 309

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
 Frame = -2

Query: 626 RRLYETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKT 447
           RRLYET ++ V++  S+MN+ HY  GI+HY    +  + +         +  V+ ID  +
Sbjct: 135 RRLYETIFVSVYS-DSRMNLFHYAVGIVHYIILPISIMCETQGVASKLPQLHVS-IDDIS 192

Query: 446 TILFVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMC 267
              +    L ++ C ++Q+Q     A  RK  +   I    + +  G  F  VS PH + 
Sbjct: 193 LTQWAGAVLFWI-CNWKQHQLAEQIANTRKGPRG-LIRNYAYGICFGGWFNLVSCPHFLF 250

Query: 266 EIIMYTVLVFLITTKTFVC--IYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYVL 93
           EI +Y  L FL+    +V   I ++V  NQ    +  H WY KTF  YP  R A+ PYVL
Sbjct: 251 EICIYLSL-FLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKSRKALIPYVL 309


>Z68116-2|CAA92173.1|  243|Caenorhabditis elegans Hypothetical
           protein F42F12.3 protein.
          Length = 243

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 21/76 (27%), Positives = 38/76 (50%)
 Frame = -2

Query: 323 HRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKK 144
           +++P G +++Y+S P+   EI+ +     L      +   ++  +N     I  H WYK+
Sbjct: 167 YKIPTGFLYEYISCPNYFGEIMEWIGYAILGWNLPALAFAIFTFANIGPRAIAHHNWYKE 226

Query: 143 TFKNYPAKRTAVFPYV 96
            F  YP  R A+ PY+
Sbjct: 227 KFPKYPPTRRALIPYI 242


>Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical
           protein F19H6.4 protein.
          Length = 243

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 25/110 (22%), Positives = 53/110 (48%)
 Frame = -2

Query: 425 TLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIMYTV 246
           +L++    Y  ++++ I   LR D  +       +++P G +++Y+S P+   EI+ +  
Sbjct: 139 SLMYCTGMYINHKSDTILRELRADGGTG------YKIPTGFLYEYISCPNYAGEIMEWIG 192

Query: 245 LVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 96
              L      +   ++ ++N     +  H+WYK+TF  YP  R  + P +
Sbjct: 193 YSILAWNLPALAFAIFTIANIGPRAVAHHKWYKETFPGYPPNRRILIPRI 242


>Z68222-3|CAA92499.1|  253|Caenorhabditis elegans Hypothetical
           protein ZK1251.3 protein.
          Length = 253

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -2

Query: 323 HRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKK 144
           + +P G  F+Y+S P+   E + +        +   +    +++ N     +  H+WY+K
Sbjct: 176 YSIPRGHYFEYISCPNYFGECLQWIGYALAARSFPAIAFAFFIVCNLAPRAMSHHKWYQK 235

Query: 143 TF-KNYPAKRTAVFPYV 96
            F + YP  R A+ P V
Sbjct: 236 MFGEQYPRDRHALVPGV 252


>AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha
           reductase familyprotein 1 protein.
          Length = 308

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = -2

Query: 383 NIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFVCIY 204
           +I+   LR      + + +    P   +F YVS P+   E+  +  + F I  ++   I 
Sbjct: 212 HILLRNLRPAGTRERRIPKPDGNPLSLLFNYVSCPNYTYEVASW--IFFSIMVQSLPAI- 268

Query: 203 LWVLSNQIQTGIHA---HEWYKKTFKNYPAKRTAVFPYVL 93
           ++  +   Q  I A   H  Y K F +YP  R A+ P+VL
Sbjct: 269 IFTTAGFAQMAIWAQGKHRNYLKEFPDYPKNRKAIVPFVL 308


>Z78413-1|CAB01663.1|  727|Caenorhabditis elegans Hypothetical
           protein T01C3.1 protein.
          Length = 727

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 632 CLRRLYETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLF-CGSQNREKVTW 462
           C      T+ L  + K+ +++++ Y    IH F   V C   + +  CGS++   V W
Sbjct: 330 CASTTLPTHVLDQYTKNLELSVNSYTGATIHNFYTQVACSPVSDVIACGSEDSRAVVW 387


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
            ZK1067.2 protein.
          Length = 2219

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = -2

Query: 533  ACIVVCVGQAPLFCGSQNREKVTWIDTKTTILFVPCTLIFLWCWYEQYQTNIIFAYLRKD 354
            AC+ +C  Q P  CG+  R K     + T+       LI +   Y  +   ++  +++K 
Sbjct: 1881 ACLGICGEQCPKICGTCERNKYIECVSGTSSTSRVHRLIMIPKCYHVFPVEVLDDHVKKQ 1940

Query: 353  KKSNK 339
            K++N+
Sbjct: 1941 KEANE 1945


>U88184-3|AAK31519.1|  648|Caenorhabditis elegans Hypothetical
           protein F36H5.8 protein.
          Length = 648

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -3

Query: 400 MNSIKQTSYSHISEKTKNQIKLLQ 329
           MN I Q  +S +SEK+KN+I LL+
Sbjct: 239 MNPIAQLGFSLLSEKSKNRISLLR 262


>Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical
           protein C06C6.7 protein.
          Length = 935

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 443 ILFVPCTLIFLWCWYEQ 393
           I  +  T+ FLWCWY+Q
Sbjct: 809 IAVILVTITFLWCWYDQ 825


>U88309-1|AAB42331.3|  395|Caenorhabditis elegans Hypothetical
           protein T23B3.4 protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 488 SQNREKVTWIDTKTTILFVPCTLIFLWCWYEQY 390
           S N+EK+     K T + +   ++F +CW   Y
Sbjct: 266 STNQEKILIAKKKVTRMLITLVIVFAFCWVPSY 298


>Z83216-8|CAB05677.1|  261|Caenorhabditis elegans Hypothetical
           protein C08F11.10 protein.
          Length = 261

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = -2

Query: 380 IIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFV 213
           I  + L++ K+    ++ED +   GR+  Y S   R+ + +MY ++   +T+K  V
Sbjct: 31  IFSSILKRKKRQQDKLSEDVKKRCGRVESYKSCCDRLHQALMYMLVENAVTSKQLV 86


>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
           protein C25H3.8 protein.
          Length = 2148

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 391 YCSYQHQRKIKVQGTNKIVVFVSIHVTFSLF--*LPQNSGACPTHTTIHA 534
           +CS QH+++ +   +N   + +++H+  SLF     QN G   T    HA
Sbjct: 562 WCSMQHEKQTRNLCSNDFSITIALHIDTSLFVNQSKQNKGMVVTPPIRHA 611


>Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical
           protein ZC455.7 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 272 MCEIIMYTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWY 150
           M E IMY ++V + +  T +C+ +   SN     +    W+
Sbjct: 1   MTENIMYIIIVLIASIATILCLLIVGRSNTFHPNLQGPIWF 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,226,180
Number of Sequences: 27780
Number of extensions: 370690
Number of successful extensions: 880
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)