Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_K11
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 110 1e-24
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 110 1e-24
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 110 1e-24
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 110 1e-24
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 110 1e-24
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 110 1e-24
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 108 5e-24
AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA seq... 29 3.0
AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA seq... 29 3.0
BC052604-1|AAH52604.1| 275|Homo sapiens PRR6 protein protein. 29 4.0
AY382899-1|AAR24368.1| 118|Homo sapiens nuclear protein p30 iso... 29 4.0
AF514992-1|AAM76703.1| 271|Homo sapiens nuclear protein p30 pro... 29 4.0
BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open readi... 28 7.0
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 1e-24
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 299 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 120
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 119 XXRMRHLKIV 90
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 1e-24
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 299 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 120
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 119 XXRMRHLKIV 90
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 110 bits (265), Expect = 1e-24
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 299 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 120
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 119 XXRMRHLKIV 90
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 110 bits (265), Expect = 1e-24
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 299 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 120
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 119 XXRMRHLKIV 90
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 1e-24
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 299 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 120
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 119 XXRMRHLKIV 90
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 1e-24
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 299 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 120
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 119 XXRMRHLKIV 90
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 108 bits (259), Expect = 5e-24
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -2
Query: 299 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 120
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 119 XXRMRHLKIV 90
RM HLKIV
Sbjct: 61 TGRMSHLKIV 70
>AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 436
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 207 IKMRPMWISCSKITILPLVSEG*AQEDYW 121
IK RP W CSK LP V+E ++ W
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281
>AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 360
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 207 IKMRPMWISCSKITILPLVSEG*AQEDYW 121
IK RP W CSK LP V+E ++ W
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205
>BC052604-1|AAH52604.1| 275|Homo sapiens PRR6 protein protein.
Length = 275
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -2
Query: 341 IRPADVFRIVKSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKS 204
I PA F+++K + T +F + + HT C+RCG S++ +S
Sbjct: 186 IVPASRFKLLKGAEHIT-TYTFNTHKAQ-HTFCKRCGVQSFYTPRS 229
>AY382899-1|AAR24368.1| 118|Homo sapiens nuclear protein p30
isoform 1 protein.
Length = 118
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -2
Query: 341 IRPADVFRIVKSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKS 204
I PA F+++K + T +F + + HT C+RCG S++ +S
Sbjct: 29 IVPASRFKLLKGAEHIT-TYTFNTHKAQ-HTFCKRCGVQSFYTPRS 72
>AF514992-1|AAM76703.1| 271|Homo sapiens nuclear protein p30
protein.
Length = 271
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -2
Query: 341 IRPADVFRIVKSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKS 204
I PA F+++K + T +F + + HT C+RCG S++ +S
Sbjct: 182 IVPASRFKLLKGAEHIT-TYTFNTHKAQ-HTFCKRCGVQSFYTPRS 225
>BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open reading
frame 182 protein.
Length = 460
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 207 IKMRPMWISCSKITILPLVSE 145
IK RP W CSK LP V+E
Sbjct: 253 IKRRPPWQICSKFGALPFVAE 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,974,837
Number of Sequences: 237096
Number of extensions: 868596
Number of successful extensions: 1774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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