Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_K09
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0502 - 34384285-34384503,34384595-34384755,34384854-343849... 115 3e-26
09_03_0154 + 12831120-12831222,12831761-12831858,12832019-128321... 115 4e-26
12_02_0917 + 24281029-24281137,24281998-24282095,24282196-242823... 113 1e-25
08_02_0695 + 20122838-20122949,20123238-20123335,20123520-201236... 112 2e-25
02_05_0704 - 31064996-31065214,31065306-31065466,31065583-310656... 112 3e-25
08_02_0439 + 17184384-17184474,17184614-17184711,17185134-171853... 106 2e-23
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 89 2e-18
01_06_0782 + 31969677-31969767,31969863-31969960,31970059-319702... 58 7e-09
03_05_0773 + 27612237-27612330,27612426-27612523,27612605-276127... 42 5e-04
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 36 0.032
03_05_0875 - 28434894-28435082,28435173-28435247,28435399-284354... 32 0.52
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 31 0.69
05_01_0546 - 4769565-4769612,4769873-4770037,4770192-4770200,477... 31 0.69
05_03_0458 + 14280953-14281866,14281964-14282912 31 1.2
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 30 2.1
01_01_1050 + 8283589-8283782,8284551-8284814,8284897-8284912,828... 30 2.1
07_03_1107 - 24024387-24024497,24025799-24026410 29 2.8
03_01_0639 - 4678993-4679034,4679880-4679945,4680040-4680150,468... 29 3.7
05_05_0358 - 24388718-24388926,24390069-24390540 29 4.8
02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038 29 4.8
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 29 4.8
09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323... 28 6.4
08_01_0955 + 9478018-9478773 28 6.4
06_03_0747 - 24119049-24119878,24120010-24120096,24120180-241202... 28 6.4
04_03_0904 + 20717005-20718087 28 6.4
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 28 6.4
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 8.5
05_02_0012 - 5575574-5575849,5575889-5575954,5576103-5576926,557... 28 8.5
05_01_0474 - 3797926-3798609 28 8.5
02_01_0482 + 3466314-3467411 28 8.5
01_04_0019 - 15134494-15135863,15135966-15136083,15136226-151362... 28 8.5
06_02_0337 - 14638429-14639295,14640281-14640460,14640743-14641831 25 9.2
>03_06_0502 -
34384285-34384503,34384595-34384755,34384854-34384931,
34385444-34385595,34385645-34385703,34385808-34385894,
34385990-34386086,34386232-34386416,34386494-34386553,
34386640-34386715,34386824-34386924,34387039-34387215,
34387302-34387399,34387505-34387604
Length = 549
Score = 115 bits (277), Expect = 3e-26
Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 5/135 (3%)
Frame = -1
Query: 603 ENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFG 424
EN G +G+T+VGSRRVVQ +AG M+ ++GK GAVF IP P++ ++C++F + G
Sbjct: 368 ENAGLLGLTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPGPIIAAIYCLLFAYVGMAG 427
Query: 423 LSALQYVDLNSSRNLYIIGFSLFFPLVLTRWM-----AAHSGVIHTGLEALDAVLQVLLS 259
+ LQ+ +LNS R +I+GFS+F L + ++ A G +HT + ++ V+ S
Sbjct: 428 VGFLQFCNLNSFRTKFIVGFSVFMGLSVPQYFNEYTSVAGYGPVHTHARWFNDMINVVFS 487
Query: 258 TSILVGGAVGCLLDN 214
+ VGGAV LLDN
Sbjct: 488 SKAFVGGAVAYLLDN 502
>09_03_0154 +
12831120-12831222,12831761-12831858,12832019-12832195,
12832307-12832407,12832503-12832578,12832665-12832724,
12832810-12832994,12833078-12833174,12833279-12833365,
12833453-12833511,12833617-12833708,12833821-12833898,
12834000-12834160,12834267-12834485
Length = 530
Score = 115 bits (276), Expect = 4e-26
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Frame = -1
Query: 624 NGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMF 445
NGT+ ENVG + +T VGSRRVVQ +AG M+ ++GK GA+F IP P+ G++C+ F
Sbjct: 342 NGTSVSVENVGLLALTHVGSRRVVQISAGFMIFFAILGKFGALFASIPLPIFAGMYCIFF 401
Query: 444 GMISAFGLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWM-----AAHSGVIHTGLEALDA 280
+ A GLS LQ+ +LNS R +I+GF+ F + + ++ A G +HTG +
Sbjct: 402 AYVGACGLSFLQFCNLNSFRTKFILGFAFFMGISVPQYFNEYTAVAGYGPVHTGARWFND 461
Query: 279 VLQVLLSTSILVGGAVGCLLDN 214
++ V S+ V G V LDN
Sbjct: 462 MINVPFSSKPFVAGLVAYFLDN 483
>12_02_0917 +
24281029-24281137,24281998-24282095,24282196-24282372,
24282490-24282590,24282684-24282759,24282843-24282902,
24282999-24283195,24283296-24283392,24283478-24283564,
24283925-24283983,24284535-24284626,24284706-24284783,
24284891-24285051,24285303-24285530
Length = 539
Score = 113 bits (272), Expect = 1e-25
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Frame = -1
Query: 705 PPPLHAINRXXXXXXXXXXXXXXXXXGNGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVL 526
PPP ++R G++ EN+G +G+TKVGSRRV+Q + G M+
Sbjct: 321 PPPASVLSRSVGLQGIGMFLEGIFGAPAGSSVSVENIGLLGLTKVGSRRVIQISTGFMIF 380
Query: 525 QGVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSALQYVDLNSSRNLYIIGFSLFFPL 346
+ GK GA F IP P+ +FC++FG+++A G+S +Q+V+ NS RN+YIIG SLF +
Sbjct: 381 FSIFGKFGAFFASIPLPIFAAIFCILFGIVAAVGVSYMQFVNKNSMRNIYIIGLSLFLGI 440
Query: 345 VLTRWM-----AAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLDN 214
+ ++ +A +G T + ++ + ++ V V +LDN
Sbjct: 441 SVPQYFHEYTASASTGPARTNAGWFNDIINTVFASGPTVSLIVASILDN 489
>08_02_0695 +
20122838-20122949,20123238-20123335,20123520-20123696,
20123790-20123890,20124049-20124124,20124213-20124272,
20124362-20124546,20124638-20124734,20124817-20124903,
20124989-20125047,20125157-20125248,20125436-20125513,
20125617-20125777,20125880-20126098
Length = 533
Score = 112 bits (270), Expect = 2e-25
Identities = 57/142 (40%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Frame = -1
Query: 624 NGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMF 445
NGT EN G + +T VGSRRVVQ +AG M+ ++GK GA+F IP P+ L+C+ F
Sbjct: 345 NGTAVSVENAGLLALTHVGSRRVVQISAGFMIFFSILGKFGAIFASIPLPIFAALYCIFF 404
Query: 444 GMISAFGLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWM-----AAHSGVIHTGLEALDA 280
I A GLS LQ+ +LNS R +I+GFS F L + ++ A G +HTG +
Sbjct: 405 AYIGACGLSFLQFCNLNSFRTKFIVGFSFFMGLSVPQYFNEYTSVAGYGPVHTGARWFND 464
Query: 279 VLQVLLSTSILVGGAVGCLLDN 214
++ V ++ V G + LDN
Sbjct: 465 MINVPFASKPFVAGLIAYFLDN 486
>02_05_0704 -
31064996-31065214,31065306-31065466,31065583-31065660,
31066560-31066651,31066775-31066833,31066924-31067010,
31067118-31067214,31067311-31067495,31067593-31067665,
31067725-31067805,31067948-31068048,31068133-31068246,
31068391-31068488,31069789-31069915
Length = 523
Score = 112 bits (269), Expect = 3e-25
Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Frame = -1
Query: 624 NGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMF 445
NG++ EN G + +T+VGSRRVVQ +AG M+ ++GK GAVF IP P+ L+C+ F
Sbjct: 335 NGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIFAALYCIFF 394
Query: 444 GMISAFGLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWM-----AAHSGVIHTGLEALDA 280
+ + G+ LQ+ +LNS R +I+GFS+F L + ++ A G +HT +
Sbjct: 395 AYVGSAGVGFLQFCNLNSFRTKFILGFSVFMGLSVPQYFNEYTSVAGYGPVHTHSRWFND 454
Query: 279 VLQVLLSTSILVGGAVGCLLDN 214
++ V+ S+ V G V LLDN
Sbjct: 455 IVNVIFSSKAFVAGFVAYLLDN 476
>08_02_0439 +
17184384-17184474,17184614-17184711,17185134-17185310,
17185450-17185550,17186028-17186103,17186438-17186682,
17186784-17186880,17186990-17187076,17187268-17187362,
17187462-17187553,17187630-17187707,17187832-17187992,
17188095-17188307
Length = 536
Score = 106 bits (255), Expect = 2e-23
Identities = 53/141 (37%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Frame = -1
Query: 621 GTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMFG 442
G+ EN+G +G T++GSRRV+Q +AG M+ ++G+ GA+F IP + ++CVMFG
Sbjct: 351 GSTVSVENIGLLGSTRIGSRRVIQISAGFMIFFSILGRFGALFASIPFTMFAAIYCVMFG 410
Query: 441 MISAFGLSALQYVDLNSSRNLYIIGFSLFFPLVLTRW-----MAAHSGVIHTGLEALDAV 277
+ A GLS +Q+ ++NS R+L+IIG SLF + + + M+A G HT +
Sbjct: 411 YVGAVGLSFMQFTNMNSMRSLFIIGVSLFLGISIPEYFFRYTMSALHGPAHTRAGWFNDY 470
Query: 276 LQVLLSTSILVGGAVGCLLDN 214
+ + S+ VG V +LDN
Sbjct: 471 INTVFSSPPTVGLIVAVILDN 491
>07_03_0435 + 18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 89.4 bits (212), Expect = 2e-18
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 19/158 (12%)
Frame = -1
Query: 621 GTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMFG 442
G+ T EN+ + TK+ SRR +QF A L+V+ GK+GA+ IP + + C +
Sbjct: 609 GSTTLTENIHTLENTKMASRRALQFGAVLLVIFSFFGKIGALLASIPVALAASVLCFTWA 668
Query: 441 MISAFGLSALQYVDLNSSRNLYIIGFSLF-------------------FPLVLTRWMAAH 319
+I A GLS L+Y SSRN+ I+GF+LF P L + AA
Sbjct: 669 LIVALGLSTLRYTQAASSRNMIIVGFTLFISMSVPAYFQQYEPSTNLILPSYLLPYAAAS 728
Query: 318 SGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLDNVXP 205
SG + +G L+ + LLS +++V V +LDN P
Sbjct: 729 SGPVRSGSNGLNFAVNALLSINVVVALLVALILDNTVP 766
>01_06_0782 +
31969677-31969767,31969863-31969960,31970059-31970235,
31970367-31970467,31970626-31970701,31970827-31970886,
31970979-31971215,31971612-31971686,31971981-31972039,
31972110-31972201,31972463-31972623,31972964-31973176
Length = 479
Score = 58.0 bits (134), Expect = 7e-09
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Frame = -1
Query: 516 VGKLGAVFIIIPQPV-VGGLFCVMFGMISAFGLSALQYVDLNSSRNLYIIGFSLFFPLVL 340
VG LG+ I + + + F + F M++A GLS LQ+ ++NS RNL+I+G S+F L +
Sbjct: 328 VGLLGSTRIGSRRVIQISAGFMIFFSMLAAVGLSFLQFTNMNSMRNLFIVGVSIFLGLSV 387
Query: 339 TRW-----MAAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLDN 214
+ MAA G HT + + + S+ VG V LDN
Sbjct: 388 PEYFFRYSMAAQRGPAHTKAGWFNDYINTIFSSPPTVGLIVAVFLDN 434
>03_05_0773 +
27612237-27612330,27612426-27612523,27612605-27612781,
27612869-27612969,27613079-27613154,27613255-27613314,
27613412-27613596,27613669-27613807,27614229-27614315,
27614939-27615127,27615243-27615461
Length = 474
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = -1
Query: 435 SAFGLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWMAAHS-----GVIHTGLEALDAVLQ 271
+A GL LQY +LN+ R +I+ SLF L + ++ + G +HT A + ++
Sbjct: 349 AAAGLCFLQYCNLNTLRTKFILSISLFLGLSIPQYFREYEVFYVFGPVHTHSPAFNVIVN 408
Query: 270 VLLSTSILVGGAVGCLLD 217
V+ S+ V + LLD
Sbjct: 409 VIFSSPATVAAILAYLLD 426
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 351 PLVLTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLDNVXP 205
P ++ A G IHTG ++ +L LLS ++++ V +LDN P
Sbjct: 530 PTYFQPYIVASHGPIHTGSSGVNYILNTLLSLNMVIAFLVALILDNTVP 578
Score = 34.7 bits (76), Expect = 0.074
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1
Query: 621 GTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVV 514
G+ T ENV I VTK+G+RR V F A +++L V
Sbjct: 476 GSATITENVHTIAVTKMGNRRAVGFGAIVLILLSFV 511
>03_05_0875 -
28434894-28435082,28435173-28435247,28435399-28435490,
28435721-28435835,28436019-28436188,28436237-28436310,
28436397-28436553,28436658-28436730,28436898-28436960,
28437067-28437341,28437710-28437816,28437884-28438788,
28439742-28440032
Length = 861
Score = 31.9 bits (69), Expect = 0.52
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Frame = +1
Query: 211 HVVQQTADGAPHEYGGGQQHLEHRVQRLQPRVYDAAVSRHPPGQDQREKQAEPYDVQVPR 390
H DGA + H HR R+ P D A G+ + A V V R
Sbjct: 21 HDDDDAEDGASSPKRHKRGHHRHR-HRVSPAAADPAEGEAEDGEILDQATAA-VGVGVGR 78
Query: 391 AVQVHILKC*ETEGRYHS-EHNAEEAADYGLRDDDEHGSQLAHDPLQHHE 537
+ + +G + EH AD + ++ H SQLA +P Q H+
Sbjct: 79 GLDADAGETGSVQGVLPAPEHGDNSDADLNIHVNELHTSQLARNPSQEHD 128
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 500 APSLPTTPCSTMRPAANCTTR-RDPTLVTPMAPTFSPKVLVPFPEP 634
APS P P + P A T +DP L P APT +P P P P
Sbjct: 552 APSPPHDPLAPSLPQAPAATPPQDPALTPPRAPTPTPP-QAPLPAP 596
>05_01_0546 -
4769565-4769612,4769873-4770037,4770192-4770200,
4770412-4770680,4772931-4772994
Length = 184
Score = 31.5 bits (68), Expect = 0.69
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 192 FISTRXSRCPTDSRRRPPRVWRW 260
FISTR SRCPT R+ P +W
Sbjct: 25 FISTRSSRCPTSFSRQAPGEHQW 47
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 467 PTTGCGMMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLVPFPEPQ 637
PT+ N APS P+ S P ++ T P+L T +P+ SP P P Q
Sbjct: 19 PTSPPSSCRNAAPSPPS---SNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQ 72
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 500 APSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLVPFPEP 634
AP P TP S R + T T TP+ PT +PK P P
Sbjct: 51 APMSPVTPSSVRRSSRLLETPTKVTSETPVKPTPTPKRKRAAPSP 95
>01_01_1050 +
8283589-8283782,8284551-8284814,8284897-8284912,
8285032-8285389,8285860-8286050,8286108-8286197,
8287399-8287596
Length = 436
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +1
Query: 169 AQAASPRSSSVPGXHVVQQTADGAPHEYGGGQQHLEHRVQRLQPRVYDAAVSRHPP---- 336
A AS S S HV+ Q G P +GGG++ + V L AAVS
Sbjct: 190 ADLASVGSESGLSYHVLLQQNSGEPKCFGGGEETSDVPVALLPGLCAKAAVSIKKSIDVW 249
Query: 337 -GQDQREKQAEPYDV 378
++ + K +PYDV
Sbjct: 250 RKKEDKLKNVQPYDV 264
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 500 APSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLVPFPEP 634
AP+ P TP P T+ PT T AP +PK P P
Sbjct: 65 APTTPATPAPAEAPTTPAPTKAPPTKST-KAPAPAPKAAKATPPP 108
>03_01_0639 -
4678993-4679034,4679880-4679945,4680040-4680150,
4680266-4680304,4680394-4680493,4680597-4680712,
4680897-4681035,4681151-4681222,4681331-4681434,
4681616-4681867
Length = 346
Score = 29.1 bits (62), Expect = 3.7
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Frame = -1
Query: 582 VTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFC-VMFGMISAFGLSALQY 406
V VGSR + Q+AA + +L G +G A + + C ++ G + L Y
Sbjct: 138 VNIVGSRTMTQYAANISLLFGFMGLFWAFAQAGDARFILSVTCAIICGYVYQCPPFRLSY 197
Query: 405 VDLNSSRNLYIIGFSLFFPLVLTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVG 241
L + F+ F PL T + ++S + AL + + ++++SILVG
Sbjct: 198 RGLGEP-----LCFAAFGPLATTAFYFSNSSRNISSGTALLPLSKTVIASSILVG 247
>05_05_0358 - 24388718-24388926,24390069-24390540
Length = 226
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 302 RGWRRWTRCSKCCCPPPYSWGAPS 231
RGWRRW R + PP S+ PS
Sbjct: 80 RGWRRWRREGQSPKPPASSFTPPS 103
>02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038
Length = 237
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 512 PTTP-CSTMRPAANCTTRRDPTLVTPMAPTFSPKVLVPFPEP 634
PT P C T A RR P TP AP+FS V PEP
Sbjct: 59 PTVPGCCTQVVPAQPQRRRFPRCFTPPAPSFSAGVA---PEP 97
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 413 SAERPKADIIPNITQKRPPTTGCGMMMNTAPSLPTTPCS 529
S+ P D+ Q+ PPTT PS+ +TP S
Sbjct: 468 SSTPPSIDLFAGFDQQLPPTTSVQQSQPAEPSISSTPQS 506
>09_03_0125 -
12531409-12531442,12531577-12531668,12531747-12532337,
12532454-12532789,12532899-12533156,12533867-12533971,
12534625-12534702,12535464-12535542,12535649-12535723,
12535828-12535946,12536042-12537106
Length = 943
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 440 IPNITQKRPPTTGCGMMMNTAPSLPTTPCSTMRPAANCTT-RRDPTLVTPMAP 595
+ ++ + R PTTG +++++PS T P +P P P AP
Sbjct: 12 VADLLRIRRPTTGAASLVSSSPSTSTAPPPRKKPRLPAAALTPTPRSTAPFAP 64
>08_01_0955 + 9478018-9478773
Length = 251
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 596 SAPSGSPRSGHGAWCNSPPASWCC 525
+ P+ +P +G G+ +PPA+W C
Sbjct: 82 ATPATAPCAGAGSTTTAPPAAWTC 105
>06_03_0747 -
24119049-24119878,24120010-24120096,24120180-24120285,
24120400-24120593,24120663-24120906,24120982-24121060,
24121148-24121227,24122181-24122276,24122372-24122443,
24122534-24122731,24123050-24123252,24123376-24123895
Length = 902
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 587 SGSPRSGHGAWCNSPPASWCCRG 519
SG P G W N+ WCC G
Sbjct: 474 SGLPPKNPGGWGNANATFWCCYG 496
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +2
Query: 425 PKADIIPNITQKRPPTTGCGMMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFS 604
PK + P + +PP T P+ TP T P T + P TP PT++
Sbjct: 59 PKPEKPPK--EHKPPAYTPPKPTPTPPTYTPTPKPTPPPY---TPKPTPPAHTPTPPTYT 113
Query: 605 PKVLVPFPEP 634
P P P P
Sbjct: 114 PTPTPPKPTP 123
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 503 PSLPTTPCSTMRPAANCTTRRDPTLVTPMAP 595
P LPT + P + T+RRDP ++ +AP
Sbjct: 452 PPLPTVSFAHAHPPSEHTSRRDPAGLSALAP 482
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 527 STMRPAANCTTRRDPTLVTPMAPTFSPKVLVP 622
+ +R A TT R P + P PT +P ++VP
Sbjct: 168 TVLRTPAAPTTTRGPAPLLPAPPTLAPPLVVP 199
>05_02_0012 -
5575574-5575849,5575889-5575954,5576103-5576926,
5577333-5577405,5577936-5577983
Length = 428
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 472 SRRPLLRYVRNDIGLRSLSTSVCGPEQLEEPVHHRV 365
+R PL + + L+S S S+C + L P HH V
Sbjct: 63 TRVPLKNMMPASVPLKSSSLSLCHRQTLSRPPHHSV 98
>05_01_0474 - 3797926-3798609
Length = 227
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 353 SRWS*PGGWRLTAASYTRGWRRWTRCSKCCCPPPYSWGAPSAV 225
S WS G + A + R WRR + CS +S+ +PS+V
Sbjct: 100 SGWSAGGARGVLGAMFRRPWRRTSPCS-TSSSSSWSYSSPSSV 141
>02_01_0482 + 3466314-3467411
Length = 365
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 265 QHLEHRVQRLQPRVYDAAVSRHPPGQ 342
Q+L H V L+ ++ D + R PPGQ
Sbjct: 328 QNLWHEVDSLRRKIRDDTICRKPPGQ 353
>01_04_0019 -
15134494-15135863,15135966-15136083,15136226-15136278,
15136293-15137271,15138980-15139054
Length = 864
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 543 AGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSA 415
AG+M++ ++ L VF+ +V LF V FG++ A LSA
Sbjct: 498 AGVMLVTTLLMALVIVFVWQYSCLVAALFLVAFGVVEAVYLSA 540
>06_02_0337 - 14638429-14639295,14640281-14640460,14640743-14641831
Length = 711
Score = 24.6 bits (51), Expect(2) = 9.2
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 680 AGWAPRGWARRW 645
AGWAP G A RW
Sbjct: 654 AGWAPTGDAPRW 665
Score = 21.4 bits (43), Expect(2) = 9.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2
Query: 581 SPRSGHGAWC 552
+PR G G WC
Sbjct: 701 NPRHGSGVWC 710
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,238,280
Number of Sequences: 37544
Number of extensions: 459853
Number of successful extensions: 1848
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1835
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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