Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_K09
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical pr... 106 1e-23
Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF100669-2|AAK39264.1| 546|Caenorhabditis elegans Hypothetical ... 94 8e-20
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 60 3e-19
Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 34 0.088
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.088
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 34 0.12
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 33 0.20
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 33 0.20
AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical ... 30 1.4
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 2.5
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 2.5
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 2.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical ... 29 2.5
AC024744-2|AAK72068.1| 327|Caenorhabditis elegans Hypothetical ... 29 2.5
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 29 3.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 3.3
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 3.3
Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical pr... 29 4.4
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 5.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid tr... 28 5.8
AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 7.6
AL032643-2|CAA21661.2| 404|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical
protein C51E3.6 protein.
Length = 555
Score = 106 bits (255), Expect = 1e-23
Identities = 58/164 (35%), Positives = 84/164 (51%)
Frame = -1
Query: 705 PPPLHAINRXXXXXXXXXXXXXXXXXGNGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVL 526
PPP HAINR G G T EN+G IGVT+V SR + A +++
Sbjct: 327 PPPSHAINRGILAEGLGSLISGLLGPGVGMTTHTENIGVIGVTRVASRWTMVMAGVFLII 386
Query: 525 QGVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSALQYVDLNSSRNLYIIGFSLFFPL 346
G++ K+GA+ IP P+VGG+ M+ +S LQ VD+ SRN+ I GFS+ F L
Sbjct: 387 LGLITKIGALLSTIPDPLVGGVLASSMAMVVGVAVSNLQTVDMTLSRNMGIFGFSMMFGL 446
Query: 345 VLTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLDN 214
++ ++ + T + +L VLL + VG C+LDN
Sbjct: 447 IVPKYFKLFP--VDTDWGWFNQILNVLLQMPMFVGALCACILDN 488
>Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical
protein T07G12.5 protein.
Length = 555
Score = 99 bits (238), Expect = 2e-21
Identities = 57/165 (34%), Positives = 85/165 (51%)
Frame = -1
Query: 705 PPPLHAINRXXXXXXXXXXXXXXXXXGNGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVL 526
PPP + NR G G T+ EN+ + VTKV SR +Q A ++L
Sbjct: 309 PPPSNT-NRAFVVEGIGCILAALWGVGTGVTTYAENIAIMSVTKVTSRITMQMAGVFLIL 367
Query: 525 QGVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSALQYVDLNSSRNLYIIGFSLFFPL 346
GV+ K A +IP+P++GGL + +I+ LS LQ VD+ SRNL IIG S+ L
Sbjct: 368 AGVISKFAAFLSMIPEPIIGGLLAMGVCLINGVSLSNLQTVDMKLSRNLTIIGVSIIMGL 427
Query: 345 VLTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLDNV 211
+ ++TG + +D V LL+ +L+GG + +LDN+
Sbjct: 428 TVATHF--EKTPLNTGNQIVDDVFGTLLTIRMLIGGVIAFVLDNI 470
>AF100669-2|AAK39264.1| 546|Caenorhabditis elegans Hypothetical
protein R11E3.2 protein.
Length = 546
Score = 94.3 bits (224), Expect = 8e-20
Identities = 49/139 (35%), Positives = 77/139 (55%)
Frame = -1
Query: 621 GTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMFG 442
G T+ EN+ + VTKV SR +Q A +++ G+ K AV +IP+PVVGG+ +
Sbjct: 341 GITTYAENIAIMSVTKVASRITMQTAGIFLLIAGIFSKFAAVLAMIPEPVVGGVLAIGIC 400
Query: 441 MISAFGLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWMAAHSGVIHTGLEALDAVLQVLL 262
M++ L L VDL SRNL I+G ++ L + + + + TG + +D V LL
Sbjct: 401 MVNGVVLRNLMTVDLRLSRNLTIMGIAVIMGLTVA--LHFENNPLKTGNQTVDNVFGTLL 458
Query: 261 STSILVGGAVGCLLDNVXP 205
+ +L+GG + LDN+ P
Sbjct: 459 TIRMLIGGIIAFTLDNIAP 477
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 60.1 bits (139), Expect(2) = 3e-19
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = -1
Query: 624 NGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMF 445
+G T+ EN+ I +TKV SR +QFA ++++ G+ K A+ IP +VGGL +
Sbjct: 372 SGVTTYAENIALIHITKVASRATMQFAGFILIMLGLFSKFAAILASIPDALVGGLLTMGI 431
Query: 444 GMISAFGLSALQ 409
MI +S LQ
Sbjct: 432 SMIGGVAMSNLQ 443
Score = 52.8 bits (121), Expect(2) = 3e-19
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = -1
Query: 414 LQYVDLNSSRNLYIIGFSLFFPLVLTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVGGA 235
L+ +DLN RNL I+G SL L++ H ++TG +D +L +LL+ +LVGG
Sbjct: 474 LKMIDLNLCRNLSIMGLSLLLGLIVPLHFEKHP--VNTGHFEIDHILNMLLNIKMLVGGV 531
Query: 234 VGCLLDNVXP 205
V LDN P
Sbjct: 532 VATFLDNTVP 541
>Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical
protein T07G12.4 protein.
Length = 485
Score = 91.1 bits (216), Expect = 7e-19
Identities = 52/162 (32%), Positives = 76/162 (46%)
Frame = -1
Query: 702 PPLHAINRXXXXXXXXXXXXXXXXXGNGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQ 523
PP ++NR G G T+ EN+ + VTKV SR +Q A +++L
Sbjct: 251 PPSSSMNRAFVVEGFGSMLAALMGVGTGVTTYSENIAIMQVTKVTSRITMQCAGVILILM 310
Query: 522 GVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSALQYVDLNSSRNLYIIGFSLFFPLV 343
G+ K A +IP+ ++GG+ MI S LQ VDL SRNL IIG S+
Sbjct: 311 GIFSKFAAFLAMIPEAIIGGVLTAGMSMICGVAFSNLQSVDLRLSRNLTIIGLSIILGCT 370
Query: 342 LTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLD 217
+ +H+G + +D + LL +LVGG + LD
Sbjct: 371 IPAHF--EKSPLHSGNKTIDDIFGTLLKMRMLVGGLIAFCLD 410
>Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical
protein T07G12.2 protein.
Length = 544
Score = 91.1 bits (216), Expect = 7e-19
Identities = 52/162 (32%), Positives = 76/162 (46%)
Frame = -1
Query: 702 PPLHAINRXXXXXXXXXXXXXXXXXGNGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQ 523
PP ++NR G G T+ EN+ + VTKV SR +Q A +++L
Sbjct: 313 PPSSSMNRAFVVEGFGSMLAALMGVGTGVTTYSENIAIMQVTKVTSRITMQCAGVILILM 372
Query: 522 GVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSALQYVDLNSSRNLYIIGFSLFFPLV 343
G+ K A +IP+ ++GG+ MI S LQ VDL SRNL IIG S+
Sbjct: 373 GIFSKFAAFLAMIPEAIIGGVLTAGMSMICGVAFSNLQSVDLRLSRNLTIIGLSIILGCT 432
Query: 342 LTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLD 217
+ +H+G + +D + LL +LVGG + LD
Sbjct: 433 IPAHF--EKSPLHSGNKTIDDIFGTLLKMRMLVGGLIAFCLD 472
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +2
Query: 443 PNITQKRPPTTGCGMMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVL 616
P T PTT T + PTT ST TT PT T P +P +
Sbjct: 79 PTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPNAV 136
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.3 bits (75), Expect = 0.088
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +1
Query: 262 QQHLEHRVQRLQPRVYDAAVSRHPPGQDQREKQAEP-YDVQVPR-AVQVHILKC*ETEGR 435
QQH + + Q+L R + H + R +P Y + R V+ HI + + G
Sbjct: 187 QQHHQQQQQQLAFRPRHRSSHHHQEPRRHRAPSPDPDYSPPLSRNKVRFHIPEEPVSRGD 246
Query: 436 YHSEHNAEEAADYGLRDDDEHGSQLAHDPLQHHEA 540
Y S + D+G DDD + DP H ++
Sbjct: 247 YVSSRHVFNTDDFGDEDDDYESVSMNPDPAPHSDS 281
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +2
Query: 452 TQKRPPTTGCGMMMNTAPSLPTTPCSTMRPAANCT----TRRDPTLVTPMAPTFSPKVLV 619
T RP TT T + P T +T P T TRR P VTP PT P+ V
Sbjct: 365 TTTRPQTTKTTTTPQTTTTRPQTTKTTTTPQTTTTRLQTTRRPPIRVTPRLPTVIPEDTV 424
Query: 620 PFPEP 634
P
Sbjct: 425 ELVTP 429
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 426 GLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWMAAHSGVI 307
GL ALQY++++ SRNL I + F L W++ S +
Sbjct: 282 GLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSAL 321
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 426 GLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWMAAHSGVI 307
GL ALQY++++ SRNL I + F L W++ S +
Sbjct: 282 GLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSAL 321
>AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical
protein F37C4.8 protein.
Length = 324
Score = 30.3 bits (65), Expect = 1.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 296 WRRWTRCSKCCCP 258
W W+ CS CCCP
Sbjct: 53 WSNWSCCSACCCP 65
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +2
Query: 452 TQKRPPTTGCGMMMNTAPSLPTT----PCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLV 619
T +P TT T LPTT P +T TT +PT TP +++ K+
Sbjct: 207 TTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWA-KLWT 265
Query: 620 PFPEPQ 637
EP+
Sbjct: 266 STAEPK 271
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +2
Query: 452 TQKRPPTTGCGMMMNTAPSLPTT----PCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLV 619
T +P TT T LPTT P +T TT +PT TP +++ K+
Sbjct: 203 TTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWA-KLWT 261
Query: 620 PFPEPQ 637
EP+
Sbjct: 262 STAEPK 267
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +2
Query: 452 TQKRPPTTGCGMMMNTAPSLPTT----PCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLV 619
T +P TT T LPTT P +T TT +PT TP +++ K+
Sbjct: 146 TTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWA-KLWT 204
Query: 620 PFPEPQ 637
EP+
Sbjct: 205 STAEPK 210
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 440 IPNITQKRPPTTGCGMMMNTAPSLPT-TPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVL 616
+ ++ PPTT T P+ PT P +T P AN TT PT V M P+ +
Sbjct: 472 VTTVSTMSPPTTV------TVPTTPTPVPTTTNTPPANPTTAT-PTTVGTMTPS-TGTTT 523
Query: 617 VPFP 628
VP P
Sbjct: 524 VPVP 527
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = +2
Query: 497 TAPSLP----TTPCSTMRPAANCTTRRDPTLVTPMAPTF-SPKVLVPFPEP 634
TAP++P TTP +T TT T TP P +P + P P
Sbjct: 674 TAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRP 724
>AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical
protein Y50E8A.10 protein.
Length = 209
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +2
Query: 464 PPTTGCGMMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAP 595
PP T + TA S+P P ++++P + P+ P P
Sbjct: 136 PPVTAKSALSKTAKSVPNAPNTSVKPTSLAANSPAPSYTNPGTP 179
>AC024744-2|AAK72068.1| 327|Caenorhabditis elegans Hypothetical
protein Y108G3AL.2 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 540 GLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSALQYVD-LNSSRNLYIIGF 364
G LQG+ G G V + VV +C+++ + + +S Q + LNS +++YI G
Sbjct: 110 GTRRLQGMTGMCGGVRGVGAGGVVSSAYCLLYRLFN-LKISRKQLISMLNSRQSVYIRGL 168
Query: 363 SLFF 352
+
Sbjct: 169 GFMY 172
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 451 NAEEAADYG--LRDDDEHGSQLAHDPLQHHE 537
N ++ A YG DDDE GS ++ P Q HE
Sbjct: 2 NRKKLAAYGQEFEDDDEEGSSVSKKPTQIHE 32
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = +2
Query: 497 TAPSLP----TTPCSTMRPAANCTTRRDPTLVTPMAPTF-SPKVLVPFPEP 634
TAP++P TTP +T TT T TP P +P + P P
Sbjct: 730 TAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRP 780
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = +2
Query: 497 TAPSLP----TTPCSTMRPAANCTTRRDPTLVTPMAPTF-SPKVLVPFPEP 634
TAP++P TTP +T TT T TP P +P + P P
Sbjct: 553 TAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRP 603
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 464 PPTTGCGMMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPT 598
PPT G G +T S PT +T+ P N + +PT T PT
Sbjct: 1354 PPTEGSGE--STTSSAPTVEPATVLPPQNRNEKPEPTKDTFALPT 1396
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 452 TQKRPPTTGCGMMMN-TAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPT 598
T K PTT M T P+ PTT ST TT + T TP PT
Sbjct: 281 TMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS-TPTTPTTPT 329
>Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical
protein C09G9.3 protein.
Length = 288
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 485 MMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPT--FSPKVLVPFPEP 634
MM +T L T P +T P + TT T T + PT + +P P P
Sbjct: 57 MMPSTHACLQTIPSTTPSPTGSTTTDPTVTTTTTVVPTGCCGEVIYLPTPRP 108
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 446 NITQKRPPTTGCGMMMNTAPSLP--TTPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLV 619
N ++ PTT T + P TT +T A TT++ T T APT + +
Sbjct: 407 NSVKREVPTTPLPTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSI 466
Query: 620 P 622
P
Sbjct: 467 P 467
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +2
Query: 449 ITQKRPPTTGCGMMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFSP 607
+T PTT T TTP +T P TT T ++ T P
Sbjct: 295 VTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPP 347
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 440 IPNITQKRPPTTGCGMMMNT---APSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFSP 607
IP+ +Q P+T G M+T S T+P + A ++ T +T ++P+ SP
Sbjct: 969 IPSTSQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLTSISPSPSP 1027
>AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid
transporter protein 7 protein.
Length = 506
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -1
Query: 477 PVVGGLFCVMFGMISAFGLSALQYVDLNSSRNLY-IIGFSLFFPLVLTRWMAAHSGVIHT 301
P V + + FG GL + +D N Y ++GFS+ +PL+L + + +
Sbjct: 106 PAVLAIQAISFGEYIVTGLDSWITIDENWRFMTYRLVGFSMLWPLMLLNFFSLKK--VAG 163
Query: 300 GLEALDAVLQVLLSTSILVGG 238
+ + +++++++ I++ G
Sbjct: 164 AFQIVATAIKLIVASIIIITG 184
>AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical
protein Y41D4A.5 protein.
Length = 456
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 419 ERPKADIIPNITQKRPPTTGCGMMMNTAPSLPTTPCSTMRPA 544
E PK D+ P + P G + AP PTT ST + A
Sbjct: 363 EEPKLDLAPPVATADLPVGSSGSVRLIAPPTPTTGPSTDQTA 404
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +2
Query: 467 PTTGCGMMMNTAPSLPTTPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLVPFP 628
PTT T + TTP +T TT T TP T +P P
Sbjct: 143 PTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAP 196
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +1
Query: 439 HSEHNAEEAADYGLRDDDE----HGSQLAHDPLQH 531
H EH A A +G DD E HG H QH
Sbjct: 692 HHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726
>AL032643-2|CAA21661.2| 404|Caenorhabditis elegans Hypothetical
protein Y54E5A.3 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 296 WRRWTRCSKCCCP 258
W W CS CCCP
Sbjct: 91 WDDWGCCSACCCP 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,152,219
Number of Sequences: 27780
Number of extensions: 318199
Number of successful extensions: 1304
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -