Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J23
         (647 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-33|CAJ44242.1|  459|Caenorhabditis elegans Hypothetical p...   138   4e-33
Z99281-32|CAB16511.1|  444|Caenorhabditis elegans Hypothetical p...   138   4e-33
U00002-1|AAA17051.1|  444|Caenorhabditis elegans rabGDI protein.      138   4e-33
U39650-5|AAK39185.2|  632|Caenorhabditis elegans Hypothetical pr...    31   0.93 
AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical ...    29   2.1  
AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm rece...    29   2.1  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z81030-3|CAB02707.1|  138|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z99281-33|CAJ44242.1|  459|Caenorhabditis elegans Hypothetical
           protein Y57G11C.10b protein.
          Length = 459

 Score =  138 bits (333), Expect = 4e-33
 Identities = 61/98 (62%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
 Frame = -2

Query: 646 KGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYD 467
           KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP D GS+SQIFIS+SYD
Sbjct: 362 KGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPSDLGSESQIFISQSYD 421

Query: 466 ATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 356
           ATTHFETTC DVL +++ GT +EFDF+ +  L L +++
Sbjct: 422 ATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 459


>Z99281-32|CAB16511.1|  444|Caenorhabditis elegans Hypothetical
           protein Y57G11C.10a protein.
          Length = 444

 Score =  138 bits (333), Expect = 4e-33
 Identities = 61/98 (62%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
 Frame = -2

Query: 646 KGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYD 467
           KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP D GS+SQIFIS+SYD
Sbjct: 347 KGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPSDLGSESQIFISQSYD 406

Query: 466 ATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 356
           ATTHFETTC DVL +++ GT +EFDF+ +  L L +++
Sbjct: 407 ATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 444


>U00002-1|AAA17051.1|  444|Caenorhabditis elegans rabGDI protein.
          Length = 444

 Score =  138 bits (333), Expect = 4e-33
 Identities = 61/98 (62%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
 Frame = -2

Query: 646 KGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYD 467
           KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP D GS+SQIFIS+SYD
Sbjct: 347 KGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPSDLGSESQIFISQSYD 406

Query: 466 ATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 356
           ATTHFETTC DVL +++ GT +EFDF+ +  L L +++
Sbjct: 407 ATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 444


>U39650-5|AAK39185.2|  632|Caenorhabditis elegans Hypothetical
           protein C25A11.2 protein.
          Length = 632

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +2

Query: 290 NKQLNNKQYTYYFFMRPLSYLLILFTKFQLDFREIKFFPSTMF---INFKHIQT 442
           N + +  Q+T+Y    P  YLLI    FQ++ R++     T+F   ++ ++IQT
Sbjct: 341 NVKSHTSQFTFYLENSPNGYLLIAGGCFQMESRQLVNLKLTLFDSGVSCRNIQT 394


>AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical
           protein Y6B3B.10 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 281 FSLNKQLNNKQYTYYFFMRPLSYLL--ILFTKFQLDFREIKFFPSTMF 418
           F L K+ N + Y YYF M   +++L  I++  F+L +   K   +T++
Sbjct: 231 FYLKKRTNRQYYKYYFLMGNAAFILFAIIWVIFRLYWYTCKLLYATIY 278


>AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm
           receptor protein 253 protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = +2

Query: 326 FFMRPLSYLLILFTKFQLDFREIKFFPSTMFINFKHIQTSCFKVCGGIIRFRNKYLALAT 505
           FF +  ++LLI  TK  +  R I  F   +FI F  +  +        I F  +YLAL++
Sbjct: 72  FFTKDSAFLLITNTKNSIFPRRISMFVEELFIGFYGLAMAIL-----AIHFIYRYLALSS 126

Query: 506 IIDWL 520
            I WL
Sbjct: 127 NI-WL 130


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -2

Query: 508 DGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKLELGEEDQ*ITERS 335
           D  + QIF+  + D     + +   V+K+Y  GTGE+ D   +K +L  ED     RS
Sbjct: 65  DREKDQIFLQTAEDLKEAIKFSRF-VVKLYAEGTGEK-DLKGLKKDLKSEDDEDDRRS 120


>Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical
           protein F58G1.7 protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = +2

Query: 278 GFSLNKQLNNKQYTYYFF-----MRPLSYLLILFTKFQLDFREIKFFPSTMFINF 427
           GF++N  L N  + Y  +     M  L   L  +  FQL      F  +T+F+NF
Sbjct: 235 GFTVNFYLLNSSFQYQIYSPMPTMHKLRLTLTFYGVFQLFISIFIFLSATIFLNF 289


>Z81030-3|CAB02707.1|  138|Caenorhabditis elegans Hypothetical
           protein C01G10.5 protein.
          Length = 138

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +2

Query: 239 YLNMKYYKVTIH*GFSLNKQLNNKQY-TYYFFMRPLSYLLILFTKFQLDF-REIKFFPST 412
           Y    YY    + G+  +   NN  Y TYY+      YL +    F + F R+I ++P  
Sbjct: 40  YTTYYYYPNNNNNGYYYDNGYNNNGYTTYYYTYGKNCYLQVDLDIFNVKFARKIYYYPDG 99

Query: 413 MFIN 424
            + N
Sbjct: 100 TYNN 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,615,219
Number of Sequences: 27780
Number of extensions: 268398
Number of successful extensions: 603
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)