Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_J20
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 204 7e-53
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 202 2e-52
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 202 3e-52
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 198 3e-51
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 198 5e-51
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 197 8e-51
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 129 5e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 100 9e-22
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 29 2.6
02_02_0106 + 6814391-6817007,6817086-6817462 29 3.5
04_04_1588 - 34633057-34633824 28 6.1
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 204 bits (497), Expect = 7e-53
Identities = 96/133 (72%), Positives = 110/133 (82%)
Frame = -3
Query: 691 IPKXSNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHP 512
+P + PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A++ PTHP
Sbjct: 116 VPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHP 175
Query: 511 IRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 332
IRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNL
Sbjct: 176 IRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNL 235
Query: 331 TLWTSDTQGDGDE 293
TLWTSD D E
Sbjct: 236 TLWTSDISEDTAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 202 bits (493), Expect = 2e-52
Identities = 94/126 (74%), Positives = 108/126 (85%)
Frame = -3
Query: 691 IPKXSNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHP 512
+P + PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A++ PTHP
Sbjct: 334 VPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHP 393
Query: 511 IRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 332
IRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNL
Sbjct: 394 IRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNL 453
Query: 331 TLWTSD 314
TLWTSD
Sbjct: 454 TLWTSD 459
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 202 bits (492), Expect = 3e-52
Identities = 98/137 (71%), Positives = 110/137 (80%), Gaps = 1/137 (0%)
Frame = -3
Query: 691 IPKXSNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHP 512
+P + ESKVFYLKMKGDY+RYLAE TG R E + AY+ A +I+ A + PTHP
Sbjct: 110 VPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHP 169
Query: 511 IRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 332
IRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNL
Sbjct: 170 IRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNL 229
Query: 331 TLWTSD-TQGDGDEPAE 284
TLWTSD T+ GDE E
Sbjct: 230 TLWTSDLTEDGGDEVKE 246
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 198 bits (484), Expect = 3e-51
Identities = 92/133 (69%), Positives = 107/133 (80%)
Frame = -3
Query: 691 IPKXSNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHP 512
+P ESKVFYLKMKGDY+RYLAE +G+ R E + AY+ A +I+ A + PTHP
Sbjct: 93 VPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHP 152
Query: 511 IRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 332
IRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLIMQLLRDNL
Sbjct: 153 IRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNL 212
Query: 331 TLWTSDTQGDGDE 293
TLWTSD DG +
Sbjct: 213 TLWTSDANDDGGD 225
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 198 bits (482), Expect = 5e-51
Identities = 94/133 (70%), Positives = 107/133 (80%)
Frame = -3
Query: 691 IPKXSNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHP 512
+P + ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+ A + THP
Sbjct: 115 VPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHP 174
Query: 511 IRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 332
IRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLIMQLLRDNL
Sbjct: 175 IRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNL 234
Query: 331 TLWTSDTQGDGDE 293
TLWTSD DG +
Sbjct: 235 TLWTSDNAEDGGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 197 bits (480), Expect = 8e-51
Identities = 92/133 (69%), Positives = 108/133 (81%)
Frame = -3
Query: 691 IPKXSNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHP 512
+P + ++KVFYLKMKGDY+RYLAE TG R + + AYQ A +I+ ++ PTHP
Sbjct: 120 VPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHP 179
Query: 511 IRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 332
IRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNL
Sbjct: 180 IRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNL 239
Query: 331 TLWTSDTQGDGDE 293
TLWTSD Q DG +
Sbjct: 240 TLWTSDMQDDGGD 252
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 129 bits (312), Expect(2) = 5e-35
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = -3
Query: 553 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 374
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 373 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 275
KDSTLIMQLLRDNL LW SD D D+ E D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
Score = 36.3 bits (80), Expect(2) = 5e-35
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -3
Query: 643 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 557
KGDYYRYLAE TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 100 bits (240), Expect = 9e-22
Identities = 56/129 (43%), Positives = 82/129 (63%)
Frame = -3
Query: 691 IPKXSNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHP 512
+P ++ E+ VF+ KMKGDYYRYLAE +TG + + + S AYQ A+ ++
Sbjct: 107 LPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL------- 158
Query: 511 IRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 332
FS+ EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL++NL
Sbjct: 159 --------FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENL 208
Query: 331 TLWTSDTQG 305
LWTS+ G
Sbjct: 209 ALWTSELTG 217
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -3
Query: 484 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 311
S Y + PD + K++FD+ + E + +Y S + ++ D LWT +
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735
Query: 310 QGDGDEPAEGGDN*YLAA 257
D ++ +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 224 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 66
CL +N H S +SSP PT C N+K F KL N ++SL L
Sbjct: 93 CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 236 KCVCWGECGEILVVAALGRLVAIALSV*RPK 328
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,308,354
Number of Sequences: 37544
Number of extensions: 343758
Number of successful extensions: 990
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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