Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J17
         (707 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0268 - 42411907-42411986,42412476-42412508,42413276-424133...   118   5e-27
03_05_0042 + 20180151-20180468,20181595-20181665,20182929-201830...    31   1.2  
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035...    29   4.8  
01_06_1364 + 36684937-36685281                                         28   6.3  

>01_07_0268 -
           42411907-42411986,42412476-42412508,42413276-42413373,
           42413499-42413596
          Length = 102

 Score =  118 bits (284), Expect = 5e-27
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -2

Query: 283 SVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPRDR 104
           SVPEA PFTAVLKFAAEEF+V P TSAIIT+DG+GINPQQ+AGNVFLKHGSELRLIPRDR
Sbjct: 35  SVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDR 94

Query: 103 VG 98
           VG
Sbjct: 95  VG 96


>03_05_0042 +
           20180151-20180468,20181595-20181665,20182929-20183087,
           20183598-20183664,20183913-20184008,20184687-20184733,
           20185113-20185193,20185704-20185806,20185967-20186028,
           20187188-20187302,20193191-20195087,20195206-20195492
          Length = 1100

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 280 VPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAG 155
           VP   P  A+   AA    VDP++  ++ D  IG+   + AG
Sbjct: 230 VPRKKPDPAIYLLAATTLGVDPSSCVVVEDSTIGLAAAKAAG 271


>07_03_0471 +
           18501496-18502104,18503009-18503260,18503367-18503537,
           18503693-18503743,18503868-18503960,18504125-18504220,
           18504318-18504368,18504452-18504570,18504909-18505017,
           18505391-18505513,18505590-18505661,18505963-18506034,
           18506125-18506191,18506260-18506402,18506494-18506565,
           18506632-18506760,18507317-18507472,18507579-18507692,
           18507791-18507889,18507974-18508051,18508402-18508536,
           18509081-18509155,18509247-18509361,18509458-18509828,
           18509903-18509965,18510049-18510120,18510285-18510413,
           18510512-18510628,18510902-18511018
          Length = 1289

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 184 IGINPQQTAGNVFLKHGSELRLIPRDRV 101
           IG+N ++ A  VF K  +ELRL+P D +
Sbjct: 378 IGLNKKRIAYFVFPKEDNELRLVPGDEL 405


>01_06_1364 + 36684937-36685281
          Length = 114

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 223 VDPATSAIITDDGIGINPQQTAGNVFLKHGSELRL 119
           +DP T   I DDG  +  +QT   V L+ GS + L
Sbjct: 67  LDPKTVKFIDDDGRFVRSEQTPEEVGLQDGSTISL 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,655,852
Number of Sequences: 37544
Number of extensions: 279877
Number of successful extensions: 440
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)