Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J17
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL356863-3|CAH70414.1|  103|Homo sapiens ubiquitin-fold modifier...   120   5e-27
CR457189-1|CAG33470.1|   85|Homo sapiens BM-002 protein.              118   2e-26
BC005193-1|AAH05193.1|   85|Homo sapiens ubiquitin-fold modifier...   118   2e-26
AL356863-1|CAH70411.1|   85|Homo sapiens ubiquitin-fold modifier...   118   2e-26
AB154404-1|BAD15373.1|   85|Homo sapiens Ubiquitin-fold modifier...   118   2e-26
Z70222-1|CAA94181.1|   80|Homo sapiens ORF protein.                   105   2e-22
AL356863-2|CAH70412.1|   80|Homo sapiens ubiquitin-fold modifier...    81   3e-15

>AL356863-3|CAH70414.1|  103|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 103

 Score =  120 bits (289), Expect = 5e-27
 Identities = 57/64 (89%), Positives = 61/64 (95%)
 Frame = -2

Query: 289 RLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPR 110
           RLSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAGNVFLKHGSELR+IPR
Sbjct: 38  RLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPR 97

Query: 109 DRVG 98
           DRVG
Sbjct: 98  DRVG 101


>CR457189-1|CAG33470.1|   85|Homo sapiens BM-002 protein.
          Length = 85

 Score =  118 bits (284), Expect = 2e-26
 Identities = 56/63 (88%), Positives = 60/63 (95%)
 Frame = -2

Query: 286 LSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPRD 107
           LSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAGNVFLKHGSELR+IPRD
Sbjct: 21  LSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRD 80

Query: 106 RVG 98
           RVG
Sbjct: 81  RVG 83


>BC005193-1|AAH05193.1|   85|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score =  118 bits (284), Expect = 2e-26
 Identities = 56/63 (88%), Positives = 60/63 (95%)
 Frame = -2

Query: 286 LSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPRD 107
           LSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAGNVFLKHGSELR+IPRD
Sbjct: 21  LSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRD 80

Query: 106 RVG 98
           RVG
Sbjct: 81  RVG 83


>AL356863-1|CAH70411.1|   85|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score =  118 bits (284), Expect = 2e-26
 Identities = 56/63 (88%), Positives = 60/63 (95%)
 Frame = -2

Query: 286 LSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPRD 107
           LSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAGNVFLKHGSELR+IPRD
Sbjct: 21  LSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRD 80

Query: 106 RVG 98
           RVG
Sbjct: 81  RVG 83


>AB154404-1|BAD15373.1|   85|Homo sapiens Ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score =  118 bits (284), Expect = 2e-26
 Identities = 56/63 (88%), Positives = 60/63 (95%)
 Frame = -2

Query: 286 LSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPRD 107
           LSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAGNVFLKHGSELR+IPRD
Sbjct: 21  LSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRD 80

Query: 106 RVG 98
           RVG
Sbjct: 81  RVG 83


>Z70222-1|CAA94181.1|   80|Homo sapiens ORF protein.
          Length = 80

 Score =  105 bits (251), Expect = 2e-22
 Identities = 50/57 (87%), Positives = 54/57 (94%)
 Frame = -2

Query: 286 LSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLI 116
           LSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAGNVFLKHGSELR+I
Sbjct: 21  LSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRII 77


>AL356863-2|CAH70412.1|   80|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 80

 Score = 81.4 bits (192), Expect = 3e-15
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = -2

Query: 286 LSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKH 137
           LSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAG     H
Sbjct: 21  LSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGEYLKTH 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,159,221
Number of Sequences: 237096
Number of extensions: 1747023
Number of successful extensions: 1870
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1870
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)