Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J17
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC...    33   0.29 
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB...    33   0.29 
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA...    33   0.29 
AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p pro...    29   8.2  
AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA...    29   8.2  

>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
           isoform C protein.
          Length = 1570

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 123 LNSEPCFRNTLPAVC*GFMPIPSSVIIALVAGSTLNSSAANFN 251
           +++E C R TLP V  G  P+P + ++A+   ST   SA + +
Sbjct: 168 ISAEICLRKTLPDVSLGKEPVPPASVLAVATSSTSAGSALSLS 210


>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
           isoform B protein.
          Length = 1570

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 123 LNSEPCFRNTLPAVC*GFMPIPSSVIIALVAGSTLNSSAANFN 251
           +++E C R TLP V  G  P+P + ++A+   ST   SA + +
Sbjct: 168 ISAEICLRKTLPDVSLGKEPVPPASVLAVATSSTSAGSALSLS 210


>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
           isoform A protein.
          Length = 1570

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 123 LNSEPCFRNTLPAVC*GFMPIPSSVIIALVAGSTLNSSAANFN 251
           +++E C R TLP V  G  P+P + ++A+   ST   SA + +
Sbjct: 168 ISAEICLRKTLPDVSLGKEPVPPASVLAVATSSTSAGSALSLS 210


>AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p
           protein.
          Length = 1838

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 334 IPRKVQDWFSLFF*TRLSVPEATPFTAVLKFAAEEFRVDP 215
           +PR    WF+L      S PE T F A+ K+ AE +  DP
Sbjct: 4   VPRLHMLWFAL-----KSSPEGTSFAALKKYIAEFYHEDP 38


>AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA
           protein.
          Length = 1833

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 334 IPRKVQDWFSLFF*TRLSVPEATPFTAVLKFAAEEFRVDP 215
           +PR    WF+L      S PE T F A+ K+ AE +  DP
Sbjct: 4   VPRLHMLWFAL-----KSSPEGTSFAALKKYIAEFYHEDP 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,675,160
Number of Sequences: 53049
Number of extensions: 513446
Number of successful extensions: 787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)