Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J15
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   198   2e-51
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    64   7e-11
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    42   2e-04
U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U10414-1|AAA19074.2|  274|Caenorhabditis elegans Hypothetical pr...    27   7.4  
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF016448-1|AAB65956.2|  477|Caenorhabditis elegans Temporarily a...    27   9.7  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  198 bits (484), Expect = 2e-51
 Identities = 92/149 (61%), Positives = 112/149 (75%), Gaps = 1/149 (0%)
 Frame = -3

Query: 478 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 299
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 298 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 119
           ++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124

Query: 118 XAKKEIGRWFTDKEVVGW-TPANENWVDE 35
            A +EI  WF  +E+  + +P   +WV E
Sbjct: 125 SANREIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 35/79 (44%), Positives = 46/79 (58%)
 Frame = -3

Query: 319 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 140
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 139 HGSDSVEXAKKEIGRWFTD 83
           H SDSV  A +E   WF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
 Frame = -3

Query: 466 IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKY 290
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  LV++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 289 MSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVEXAK 110
           +SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD  + A+
Sbjct: 74  ISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE-DAAE 130

Query: 109 KEI 101
           KE+
Sbjct: 131 KEL 133


>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -3

Query: 352 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 257
           LL + + ++ S   +PG V+++   P++P  W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175


>U10414-1|AAA19074.2|  274|Caenorhabditis elegans Hypothetical
           protein F42A10.3 protein.
          Length = 274

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -3

Query: 184 TIRGDLCIQVGRNIIHGSDSVEXAKKEIGRWFTDKEVVGWTP 59
           T+   LC +     +H SD V+     + +W   +E + W P
Sbjct: 82  TVYSALCFRDVAKRVHLSDFVDRNLDVLRKWIRHEETIDWVP 123


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 431 CGHHY*TFRKERLQTSRFEIRMAIRRTSP 345
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


>Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical
           protein T23F1.7b protein.
          Length = 799

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -3

Query: 334 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 176
           SDL S  +      +  +  VV   WEG+ +V+ G  R + G  N A+  P   R
Sbjct: 66  SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120


>Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical
           protein T23F1.7a protein.
          Length = 779

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -3

Query: 334 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 176
           SDL S  +      +  +  VV   WEG+ +V+ G  R + G  N A+  P   R
Sbjct: 66  SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
            F12F6.6 protein.
          Length = 1126

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = -3

Query: 325  ASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPADSQPGTI 179
            AS  F      Y+    V+  VW G    +T  Q +   GATN  D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054


>AF016448-1|AAB65956.2|  477|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 196 protein.
          Length = 477

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -3

Query: 220 LGATNPADSQPGTIRGDLCIQVGRNI---IHGSDSVEXAKKEIGRWFTDK 80
           +G   P D+ P   RG+ C  V ++I   I+GS  +   + E+ +W   K
Sbjct: 341 MGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTK 390


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,272,774
Number of Sequences: 27780
Number of extensions: 271085
Number of successful extensions: 789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)