Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_J12
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 137 7e-33
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 126 2e-29
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 115 3e-26
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 109 2e-24
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 91 6e-19
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 91 8e-19
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 74 7e-14
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 32 0.29
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 29 2.0
U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 28 4.7
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF016414-4|AAG24021.2| 230|Caenorhabditis elegans Serpentine re... 28 4.7
AF016414-3|AAW88405.1| 329|Caenorhabditis elegans Serpentine re... 28 4.7
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z70265-3|CAA94201.2| 167|Caenorhabditis elegans Hypothetical pr... 27 8.2
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 137 bits (331), Expect = 7e-33
Identities = 70/177 (39%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
Frame = -3
Query: 572 NIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQEPL 393
++DYLETW+ + A++ G RSIG+SNF +QI R+ + ++P Q+E++P TQ L
Sbjct: 135 DVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKL 194
Query: 392 VAHCQSLGIAVMAYSPFGFVVSRG-QTGAPPPRSDDPTLTALANKYRKSVGQILLRYLID 216
C+ GI V+ YSP G S + P + + +A + K+ QI+LR+ +D
Sbjct: 195 REFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQIILRWFVD 254
Query: 215 RGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHRVIDISDWK-DYPNYP 48
GL IPKS QRI++N+ +FDFQLT EE++ I+ NKN R++D+S D+P+ P
Sbjct: 255 SGLSAIPKSVTPQRISENLAVFDFQLTAEEISKIDGINKNWRIVDLSQRDGDHPHCP 311
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 126 bits (303), Expect = 2e-29
Identities = 65/167 (38%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Frame = -3
Query: 572 NIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQEPL 393
++DYLETW+ + A++ G RSIG+SNF +QI R+ + ++P Q+E++P TQ L
Sbjct: 135 DVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKL 194
Query: 392 VAHCQSLGIAVMAYSPFGFVVSR-GQTGAPPPRSDDPTLTALANKYRKSVGQILLRYLID 216
C+ GI V+ YSP G S + P + + +A + K+ QI+LR+ +D
Sbjct: 195 REFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQIILRWFVD 254
Query: 215 RGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHRVIDIS 75
GL IPKS QRI +NI + DFQL+ EE+ AI+ N+ R++D S
Sbjct: 255 SGLSAIPKSVTPQRIIENISVIDFQLSAEEIQAIDGVNRGWRLVDPS 301
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 115 bits (276), Expect = 3e-26
Identities = 62/177 (35%), Positives = 105/177 (59%), Gaps = 2/177 (1%)
Frame = -3
Query: 572 NIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQEPL 393
++DYLETW+ ++DA + G RSIG++NFN Q+ ++ + I+P + Q+E+NP QE +
Sbjct: 142 DVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVLQVEMNPFLDQEEI 201
Query: 392 VAHCQSLGIAVMAYSPFGFVVSR-GQTGAPPPRSDDPTLTALANKYRKSVGQILLRYLID 216
C+ GI + A+ G S + P + TL ++A + KSV Q+L+R+ ID
Sbjct: 202 RQFCREKGIILTAFMLTGNPGSALYRKHEDPNLLYNETLQSIAKGHGKSVVQVLVRWAID 261
Query: 215 RGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHRVID-ISDWKDYPNYP 48
+ KS+ +RI QNI++F F+LT +E+A I N + R+++ + D+P +P
Sbjct: 262 LRTTALVKSSESKRIRQNINIFKFRLTSQEIARIKALNIDFRILNPLLGNYDHPYFP 318
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 109 bits (262), Expect = 2e-24
Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 8/195 (4%)
Frame = -3
Query: 605 PIXTKPDDSPDNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQI 426
P+ + + I +++TW+ ++ + G +++GVSNF+ Q+ L + ++P Q+
Sbjct: 127 PLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQQV 186
Query: 425 EVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVSRGQTGAPP----PRSD---DPTLTALA 267
E + Q+ L A C+ LG+ V AY+P G S G+ A P P D +P + LA
Sbjct: 187 ECHIYWPQQELRALCKKLGVTVTAYAPLG---SPGRKAARPDGVWPEGDPLLEPIVKQLA 243
Query: 266 NKYRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHRV 87
KY K+ QIL+R+L G+ IPKS + RI +NI FDF+L+ E++ +N R+
Sbjct: 244 AKYHKTAAQILIRHLTQHGISTIPKSVSPDRIVENISTFDFKLSDEDMHTLNSIETRTRL 303
Query: 86 IDISDWK-DYPNYPN 45
I+D+ +P +P+
Sbjct: 304 F-IADFAVKHPFFPH 317
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 105 bits (251), Expect = 3e-23
Identities = 63/185 (34%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Frame = -3
Query: 620 YLIHFPIXTKPDDSPDNIDYLE-TWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIR 444
Y+IH P PD + + E TW+ M+ + RSIGVSN++ + L+ + I
Sbjct: 103 YMIHMP--QLPDWIVNQKETKEKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASIL 160
Query: 443 PVINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVSRGQTGAPPPRSDDPTLTALAN 264
P NQ+E++P Q L +C LGI M Y P +++G+ +D TL +A+
Sbjct: 161 PHANQVELHPWFHQADLKNYCDELGILTMGYCP----LAKGKY------LEDETLCKIAS 210
Query: 263 KYRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQF-NKNHRV 87
KY+KS QI LR+ I + + +PKST+ +R+ +N ++FDF+L+ E++ +N F ++N ++
Sbjct: 211 KYQKSPAQICLRWSIQQNVPTVPKSTDCRRLKENTNVFDFELSAEDMNTLNSFSSQNRKI 270
Query: 86 IDISD 72
+D+S+
Sbjct: 271 VDLSN 275
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 102 bits (244), Expect = 2e-22
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Frame = -3
Query: 620 YLIHFPIXTKPDDS-PDNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIR 444
YL H P TK D S ++ + W+G + LGL ++IGVSNFN +QI R+++ +
Sbjct: 111 YLAHIPASTKDDGSFRSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVP 170
Query: 443 PVINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGF---VVSRGQTGAPPPRS------- 294
+Q+E++ Q+ C+ I + AY+ G + G G P S
Sbjct: 171 IHASQLELHLYLPQKAHRELCKKHNILITAYATLGSPGRMSVVGSNGRPLFESTQNSENE 230
Query: 293 -DDPTLTALANKYRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAA 117
+D + ALA KY K+ QILLR ++ G+I IPK+TN +R+ +NI++FDF ++ EV
Sbjct: 231 MNDKHVKALAQKYSKTPAQILLRATVEMGIIVIPKTTNPERMKENINIFDFNISNAEVNL 290
Query: 116 I--NQFNKNHRVIDISDWKDYPNYP 48
+ ++ K R+ + D+P P
Sbjct: 291 LEAHERTKQERLFWWPNVADHPEDP 315
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 100 bits (239), Expect = 1e-21
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Frame = -3
Query: 620 YLIHFPIXTKPDDSPDNIDYLE-TWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIR 444
YL H P D S +E W+ + GLA+++GVSN+N QI+R ++ +
Sbjct: 111 YLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALG-LT 169
Query: 443 PVIN-QIEVNPTNTQEPLVAHCQSLGIAVMAYSPFG------FVVSRGQT--GAPPPRS- 294
PV N Q+E++ Q V C+ I+V +Y+ G F + GQ AP P
Sbjct: 170 PVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPAPSDL 229
Query: 293 DDPTLTALANKYRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAI 114
D + ALA K K+ Q+LLRY +DRG +PKS + RI +N ++FDF LT E++A +
Sbjct: 230 QDQNVLALAEKTHKTPAQVLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKL 289
Query: 113 NQFNKNHRVIDISDW 69
+ +KN + + + D+
Sbjct: 290 EE-SKNSQRLFLQDF 303
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 91.1 bits (216), Expect = 6e-19
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Frame = -3
Query: 620 YLIHFPIXTKPD-DSPDNIDYLE-TWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYI 447
YL+H+P D D +N +Y + ++ +++A+ G RSIGVSN+ + L + + +
Sbjct: 117 YLVHYPKPNDSDNDDVNNAEYRKIAYEVLEEAKAAGKVRSIGVSNYEIVHLEELKTYAKV 176
Query: 446 RPVINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVSRGQTGAPPPRSDDPTLTALA 267
P NQ+E +P + PL +C+ I A+S ++R + P +DP + LA
Sbjct: 177 PPCANQLEYHPHFARIPLQKYCKEKNIFFQAFSS----LARHE----PKLIEDPVVVELA 228
Query: 266 NKYRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHRV 87
K+ SV +LL + + + + +PKS RI +N + D LT E++ ++ ++
Sbjct: 229 KKHNTSVPLVLLAWALRQNVGIVPKSVTPSRIVENFKVIDIALTPEDIQSLTALDRGQHY 288
Query: 86 IDISDW 69
I + W
Sbjct: 289 IRCTGW 294
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 90.6 bits (215), Expect = 8e-19
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Frame = -3
Query: 617 LIHFPIXTKPDDSPDNIDY-LETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRP 441
LIH+P + ++P N +E+W M + G RS+GVSNF + L +S + P
Sbjct: 108 LIHWPGSSLKSENPANKKLRVESWNVMCEMMAEGKLRSVGVSNFEICHLEELKKDSNVVP 167
Query: 440 VINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVSRGQTGAPPPRSDDPTLTALANK 261
+NQ+E +P Q+ LV +C I AYS G R Q S++P + LA K
Sbjct: 168 AVNQVEYHPHFHQDDLVKYCNENNIHFQAYSSLGSPTYRKQL------SEEPLIKELAQK 221
Query: 260 YRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHR 90
Y + +LL + +G+ +P++TN + +A N + +T E++ + H+
Sbjct: 222 YNVEIPVLLLGFAYCQGISVLPRTTNPEHVATNFKVTKLAITQEDIDRLLALTVEHK 278
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 74.1 bits (174), Expect = 7e-14
Identities = 58/187 (31%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
Frame = -3
Query: 620 YLIHFP-IXTKPDDSPDNIDY-LETWQGMQDARQLGLARSIGVSNFNATQITRLVS-NSY 450
YLIH+P D P N + TW + + + G RS+GVS+F + L
Sbjct: 104 YLIHYPKSFDYGDQDPMNKTLRIATWNDLWECKNAGKIRSVGVSSFEIRHLEELKDLGKN 163
Query: 449 IRPVINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVSRGQTGAPPPRSDDPTLTAL 270
P NQ+E +P T+E L +C+S GI A+S + +T +T L
Sbjct: 164 FPPCCNQVEYHPHFTREELKNYCKSEGIFFQAFSS---LARHNET-----LLSSEIITRL 215
Query: 269 ANKYRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHR 90
A KY +LL + + + IPKSTN +R+AQN L L EEV I N +
Sbjct: 216 AEKYHVPKTTVLLSWATSQKVGIIPKSTNPERLAQN--LKTVLLEEEEVKKICNLNLDKH 273
Query: 89 VIDISDW 69
+ + W
Sbjct: 274 YVRTTGW 280
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 72.9 bits (171), Expect = 2e-13
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Frame = -3
Query: 617 LIHFPIXTKPDDSPDNIDYL--ETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIR 444
L+H+P +D +N +TW ++ G RSIGVSN+ I + S I
Sbjct: 108 LVHYPRPLDTEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIE 167
Query: 443 PVINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVSRGQTGAPPPRSDDPTLTALAN 264
P +NQIE +P ++ L A+C I A+SP G RG D T+ +A
Sbjct: 168 PQVNQIEYHPHFQRKVLRAYCNKNEILFQAFSPLG----RGN----KTLLGDSTMERIAL 219
Query: 263 KYRKSVGQILLRYLIDRGLIPIPKSTNKQRIAQNIDLFDFQLTFEEVAAINQFNKNHRVI 84
++ +V ++L +++ + KS R+A+N +L+ +E IN N +
Sbjct: 220 CHKTTVANVILAWIMKGKYGVVAKSVTPSRVAENYTSLSLELSDDEFEKINGLNLETPYV 279
Query: 83 DISDW 69
+ W
Sbjct: 280 EDRGW 284
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 64.9 bits (151), Expect = 4e-11
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Frame = -3
Query: 551 WQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQEPLVAHCQSL 372
WQ ++ A++ G RSIGVSN+ + + + IRPV+NQ E P T+ L C
Sbjct: 144 WQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQPYLTRPTLKKFCDLN 203
Query: 371 GIAVMAYSPFGFVVSRGQTGAPPPRSDDPTLTALANKYRKSVGQILLRYLIDRGLIPIPK 192
I V +YS + G + P L L KY ++ IL + IPK
Sbjct: 204 NIVVQSYSSLCW-------GDKEILQEKP-LVDLCQKYNQTPQAILYAFAHCSNTSMIPK 255
Query: 191 STNKQRIAQNI-DLFDFQLTFEEVAAINQFNK 99
S RI N+ + +LT +E+ ++ +K
Sbjct: 256 SATPSRIHDNLHNTIKIKLTEDELKSLRSLDK 287
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 620 YLIHFPIXTKPDDSPDNIDYLET-WQGMQDARQLGLARSIGVSNFNATQI 474
YL H P D S +E W+ + GLA+++GVSN+N QI
Sbjct: 81 YLAHMPTAFSDDMSQKIESSVEDIWRQFDAVYKAGLAKAVGVSNWNNDQI 130
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -3
Query: 509 SIGVSNFNATQITRLVSNSYIRPVINQIEVN 417
SIGVS+F+A Q+ ++ + ++P IN + ++
Sbjct: 160 SIGVSDFSARQLKTIIDHFDVKPSINHVRLD 190
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 547 KACRTRGSWVWPGPLEYPTSTLRRSR 470
KA RG W WP P+ Y S RR +
Sbjct: 680 KAEEKRGDWKWPIPISYRDSEHRRKK 705
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 547 KACRTRGSWVWPGPLEYPTSTLRRSR 470
KA RG W WP P+ Y S RR +
Sbjct: 680 KAEEKRGDWKWPIPISYRDSEHRRKK 705
>U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical
protein C08A9.3 protein.
Length = 739
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -3
Query: 506 IGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVS 327
+G++N N T L++N Y Q+ +N TN + SL A + Y PF V
Sbjct: 26 LGINNVNLTTEGNLIANLY------QVILNSTNEPPAIRVSVDSLA-ATIKY-PFTMTVV 77
Query: 326 RGQT 315
RG+T
Sbjct: 78 RGKT 81
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +1
Query: 235 RICPTLFLYLLASAVRVGSSERGGGAPV*PRDTTNPNGLYAITAIPRLWQCATSGSC 405
R C TL +LL S + + GAP D TN IP W+C C
Sbjct: 2 RTCLTLTGFLLISMATISVGLQPMGAPTRKCDATNSFQCQDGRCIPMSWRCDGDIDC 58
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +1
Query: 235 RICPTLFLYLLASAVRVGSSERGGGAPV*PRDTTNPNGLYAITAIPRLWQCATSGSC 405
R C TL +LL S + + GAP D TN IP W+C C
Sbjct: 2 RTCLTLTGFLLISMATISVGLQPMGAPTRKCDATNSFQCQDGRCIPMSWRCDGDIDC 58
>AF016414-4|AAG24021.2| 230|Caenorhabditis elegans Serpentine
receptor, class h protein210, isoform a protein.
Length = 230
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 509 TWPDPAAARPACLARFPDSRCY 574
T PD A A PA L R P RC+
Sbjct: 158 TTPDQAVAGPAILQRLPTLRCF 179
>AF016414-3|AAW88405.1| 329|Caenorhabditis elegans Serpentine
receptor, class h protein210, isoform b protein.
Length = 329
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 509 TWPDPAAARPACLARFPDSRCY 574
T PD A A PA L R P RC+
Sbjct: 158 TTPDQAVAGPAILQRLPTLRCF 179
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 371 GIAVMAYSPFGFVVSRGQTGAPPPRSDDPTLTALANKYRKSVG 243
GI MA + GFV S + + DDP+ +A +Y ++ G
Sbjct: 2134 GIVGMAQTVTGFVQSLAEMTMKEIKPDDPSTRRVARRYNRNHG 2176
>Z70265-3|CAA94201.2| 167|Caenorhabditis elegans Hypothetical
protein C05A9.2 protein.
Length = 167
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 325 RDTTNPNGLYAITAIPRLWQCATSGSCVFVGFTSIWLITGLM*LLLTNLVICV 483
R T+P + +T SGS +F G I++I G + LL L++ V
Sbjct: 88 RIVTSPRNVIEVTTSSDSRPSVPSGSSMFFGTQGIFIILGAIMALLIILILLV 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,804,300
Number of Sequences: 27780
Number of extensions: 317183
Number of successful extensions: 961
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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