Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J07
         (302 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025937-1|ABG02181.1|  520|Drosophila melanogaster IP13955p pro...    29   1.5  
AY119569-1|AAM50223.1|  131|Drosophila melanogaster HL07933p pro...    27   6.0  
AF154418-1|AAD38397.1|  131|Drosophila melanogaster anoxia upreg...    27   6.0  
AE014297-1193|AAF54551.1|  131|Drosophila melanogaster CG6544-PC...    27   6.0  

>BT025937-1|ABG02181.1|  520|Drosophila melanogaster IP13955p
           protein.
          Length = 520

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 221 KWCRRAGGRCWWTSRSSLRDRRGCWS 298
           KW R+  G+CWW  R   R  +  WS
Sbjct: 18  KW-RQLFGQCWWKKRRRQRSYQDYWS 42


>AY119569-1|AAM50223.1|  131|Drosophila melanogaster HL07933p
           protein.
          Length = 131

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 239 LPYGTTYRHYSYRV 198
           LP GT YRH+SY V
Sbjct: 118 LPGGTKYRHFSYHV 131


>AF154418-1|AAD38397.1|  131|Drosophila melanogaster anoxia
           upregulated protein protein.
          Length = 131

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 239 LPYGTTYRHYSYRV 198
           LP GT YRH+SY V
Sbjct: 118 LPGGTKYRHFSYHV 131


>AE014297-1193|AAF54551.1|  131|Drosophila melanogaster CG6544-PC,
           isoform C protein.
          Length = 131

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 239 LPYGTTYRHYSYRV 198
           LP GT YRH+SY V
Sbjct: 118 LPGGTKYRHFSYHV 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,897,240
Number of Sequences: 53049
Number of extensions: 170400
Number of successful extensions: 291
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)