Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_J04
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 326 4e-89
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 326 4e-89
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 326 4e-89
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 326 4e-89
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 326 4e-89
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 326 4e-89
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 326 4e-89
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 326 4e-89
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 326 4e-89
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 326 4e-89
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 316 6e-86
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 316 6e-86
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 316 6e-86
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 316 6e-86
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 316 6e-86
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 313 4e-85
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 298 9e-81
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.5
BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III do... 31 2.6
BC033635-1|AAH33635.1| 753|Homo sapiens FNDC3B protein protein. 31 2.6
AY358367-1|AAQ88733.1| 625|Homo sapiens YVTM2421 protein. 31 2.6
AY358146-1|AAQ88513.1| 847|Homo sapiens YVTM2421 protein. 31 2.6
AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte di... 31 2.6
AK075220-1|BAC11480.1| 760|Homo sapiens protein ( Homo sapiens ... 31 2.6
AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein. 31 2.6
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein. 30 6.0
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 8.0
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 8.0
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 30 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 89
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 90 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 149
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 150 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 209
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 210 GKGNKPWISLPRGKG 224
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 223 KGIRLTIAEERDKRLAAK 240
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 29 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 88
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 89 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 148
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 149 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 208
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 209 GKGNKPWISLPRGKG 223
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 222 KGIRLTIAEERDKRLAAK 239
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 326 bits (801), Expect = 4e-89
Identities = 143/195 (73%), Positives = 171/195 (87%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
GKG K +ISLPRG+G
Sbjct: 229 GKGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 316 bits (775), Expect = 6e-86
Identities = 137/195 (70%), Positives = 168/195 (86%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T K
Sbjct: 109 FAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I++FIKF++GNLCM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
G G K +ISLPRG+G
Sbjct: 229 GNGNKPWISLPRGKG 243
Score = 33.9 bits (74), Expect = 0.49
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLT+AEERDKR+A +
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 316 bits (775), Expect = 6e-86
Identities = 137/195 (70%), Positives = 168/195 (86%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGR
Sbjct: 48 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 107
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T K
Sbjct: 108 FAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 167
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I++FIKF++GNLCM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 168 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227
Query: 97 GKGTKAYISLPRGQG 53
G G K +ISLPRG+G
Sbjct: 228 GNGNKPWISLPRGKG 242
Score = 35.5 bits (78), Expect = 0.16
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLT+AEERDKR+AA+
Sbjct: 241 KGIRLTVAEERDKRLAAK 258
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 316 bits (775), Expect = 6e-86
Identities = 137/195 (70%), Positives = 168/195 (86%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T K
Sbjct: 109 FAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I++FIKF++GNLCM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
G G K +ISLPRG+G
Sbjct: 229 GNGNKPWISLPRGKG 243
Score = 35.5 bits (78), Expect = 0.16
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLT+AEERDKR+AA+
Sbjct: 242 KGIRLTVAEERDKRLAAK 259
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 316 bits (775), Expect = 6e-86
Identities = 137/195 (70%), Positives = 168/195 (86%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T K
Sbjct: 109 FAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I++FIKF++GNLCM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
G G K +ISLPRG+G
Sbjct: 229 GNGNKPWISLPRGKG 243
Score = 33.9 bits (74), Expect = 0.49
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLT+AEERDKR+A +
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 316 bits (775), Expect = 6e-86
Identities = 137/195 (70%), Positives = 168/195 (86%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T K
Sbjct: 109 FAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I++FIKF++GNLCM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
G G K +ISLPRG+G
Sbjct: 229 GNGNKPWISLPRGKG 243
Score = 33.9 bits (74), Expect = 0.49
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLT+AEERDKR+A +
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 313 bits (768), Expect = 4e-85
Identities = 136/195 (69%), Positives = 167/195 (85%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T K
Sbjct: 109 FAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I++FIKF++GNLCM+ GG NLGRVG I +RERHPGSF +VH+KD+ G++FATRL+N+F+I
Sbjct: 169 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
G G K +ISLPRG+G
Sbjct: 229 GNGNKPWISLPRGKG 243
Score = 33.9 bits (74), Expect = 0.49
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLT+AEERDKR+A +
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 298 bits (732), Expect = 9e-81
Identities = 129/195 (66%), Positives = 162/195 (83%)
Frame = -3
Query: 637 RNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 458
RNR KYALTG+EV KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG
Sbjct: 49 RNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGC 108
Query: 457 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 278
F +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND++Q+D+ T K
Sbjct: 109 FAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGK 168
Query: 277 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 98
I FIKF++GN+CM+ G NLGRVG I +RERHPGS D+VH+KD+ G++FATR++N+F+I
Sbjct: 169 ITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVI 228
Query: 97 GKGTKAYISLPRGQG 53
G G K +ISLPRG+G
Sbjct: 229 GNGNKPWISLPRGKG 243
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 57 KGIRLTIAEERDKRIAAQ 4
KGIRLTIAEERDKR+AA+
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 541 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 395
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III
domain containing 3B protein.
Length = 1204
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 248
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 549 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 589
>BC033635-1|AAH33635.1| 753|Homo sapiens FNDC3B protein protein.
Length = 753
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 248
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 98 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 138
>AY358367-1|AAQ88733.1| 625|Homo sapiens YVTM2421 protein.
Length = 625
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 248
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 545 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 585
>AY358146-1|AAQ88513.1| 847|Homo sapiens YVTM2421 protein.
Length = 847
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 248
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 192 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 232
>AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte
differentiation 104 variant protein.
Length = 1204
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 248
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 549 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 589
>AK075220-1|BAC11480.1| 760|Homo sapiens protein ( Homo sapiens
cDNA FLJ90739 fis, clone PLACE1010968, highly similar to
FAD104. ).
Length = 760
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 248
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 105 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 145
>AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein.
Length = 1204
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 TLFNLVAKVCPVESLMCTMSKE-PGCLSRDTMVPTRPKLRPPVIIHKF 248
T N K CP E L+CT S + PG PTRP ++ PV H F
Sbjct: 549 TASNTEGKSCPSEVLVCTTSPDRPG-------PPTRPLVKGPVTSHGF 589
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 541 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 395
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 219 TWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 127
TWG+ P C A LCT P+D P+
Sbjct: 387 TWGLCMPPCGPNPTRARQRLCTPLLPKDPPT 417
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -1
Query: 321 SKSTIPSS*TLQLRR-LWTSSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRT 145
S T+P++ T L T+ P T A T G PS PA P PS SRT
Sbjct: 2108 SPHTVPTAWTSATSGILGTTHITEPSTGTSHTPAATTGTTQPSTPALSSPHPS----SRT 2163
Query: 144 PRDTPSP 124
PSP
Sbjct: 2164 TESPPSP 2170
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 550 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 386
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,161,080
Number of Sequences: 237096
Number of extensions: 2320211
Number of successful extensions: 14925
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14910
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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