Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J03
         (364 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0025 - 25165438-25165708,25165807-25166048,25166191-251662...    85   2e-17
12_01_0284 + 2117288-2117509                                           83   5e-17
11_01_0276 + 2057486-2057707                                           83   5e-17
06_03_0285 - 19160898-19161065,19161465-19161564,19163206-19163414     27   6.0  
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467...    27   6.0  
01_05_0013 - 17156017-17157647,17157977-17158144,17160064-171601...    27   6.0  
01_07_0384 + 43209423-43210241                                         26   7.9  
01_06_1194 - 35313132-35313154,35314462-35314604,35314751-353154...    26   7.9  

>02_05_0025 -
           25165438-25165708,25165807-25166048,25166191-25166222,
           25167174-25167231,25167331-25167438
          Length = 236

 Score = 84.6 bits (200), Expect = 2e-17
 Identities = 36/49 (73%), Positives = 44/49 (89%)
 Frame = -2

Query: 225 SKMLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIXLKKW 79
           ++M+EV  NDRLGKKVRVKCN DDT+GDLKKL+AAQTGTR +KI ++KW
Sbjct: 162 AEMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKW 210



 Score = 40.3 bits (90), Expect = 5e-04
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -3

Query: 65  KDHIKLADYEIHDGMNLEL 9
           KDHI LADYEIHDGM LEL
Sbjct: 215 KDHITLADYEIHDGMGLEL 233


>12_01_0284 + 2117288-2117509
          Length = 73

 Score = 83.4 bits (197), Expect = 5e-17
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -2

Query: 219 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIXLKKW 79
           M+EV  NDRLGKKVRVKCN DDT+GDLKKL+AAQTGTR +KI ++KW
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKW 47



 Score = 38.3 bits (85), Expect = 0.002
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -3

Query: 65  KDHIKLADYEIHDGMNLEL 9
           KDHI L DYEIHDGM LEL
Sbjct: 52  KDHITLRDYEIHDGMGLEL 70


>11_01_0276 + 2057486-2057707
          Length = 73

 Score = 83.4 bits (197), Expect = 5e-17
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -2

Query: 219 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIXLKKW 79
           M+EV  NDRLGKKVRVKCN DDT+GDLKKL+AAQTGTR +KI ++KW
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKW 47



 Score = 38.3 bits (85), Expect = 0.002
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -3

Query: 65  KDHIKLADYEIHDGMNLEL 9
           KDHI L DYEIHDGM LEL
Sbjct: 52  KDHITLKDYEIHDGMGLEL 70


>06_03_0285 - 19160898-19161065,19161465-19161564,19163206-19163414
          Length = 158

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3

Query: 182 RFELNATLTIPWVI*RS**PHKLALDTTK*XSRNGTQDXKDH 57
           R+EL AT   P +   S  P KL L +T+   R G  D  DH
Sbjct: 48  RYELVATGATPSLPNTSGCPSKLGLPSTRRIERLGFPDDNDH 89


>06_01_0645 +
           4670966-4671021,4671128-4671177,4671270-4671350,
           4671862-4672078,4673220-4673607,4673830-4674033,
           4675174-4675334,4675401-4675586,4675732-4675963,
           4676530-4676732,4677074-4677208,4677367-4677550
          Length = 698

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 225 SKMLEVTCNDRLGKKVRVKCNPDDTVGDLKKL 130
           +K +   CND+LGKKV      DD+  +  ++
Sbjct: 94  AKRVAEECNDQLGKKVGYSIRFDDSTSNATRI 125


>01_05_0013 -
           17156017-17157647,17157977-17158144,17160064-17160113,
           17160796-17160833,17161102-17161212
          Length = 665

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -2

Query: 222 KMLEVTCNDRLGKKVRVKCNPDDTVGD 142
           ++L++  N  +G+K+R+KC   D+  D
Sbjct: 33  QLLKMVINPEVGRKIRLKCRGGDSPQD 59


>01_07_0384 + 43209423-43210241
          Length = 272

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 101 SYLVPVCAAINFFKSPTVSSGLHLTRTFLPSRSLHVTSSILL 226
           SY     A+IN     ++++G H TR  L S S   TSS  L
Sbjct: 220 SYTGTSSASINMTTMISLNNGFHSTRPVLASASTTPTSSSFL 261


>01_06_1194 -
           35313132-35313154,35314462-35314604,35314751-35315444,
           35315746-35315895,35316011-35316419
          Length = 472

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 303 PFKIFTAVLMVFITFFFQF 359
           PF++FTAV +V + F F F
Sbjct: 235 PFELFTAVPIVVVAFTFHF 253


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,406,827
Number of Sequences: 37544
Number of extensions: 109205
Number of successful extensions: 238
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)