Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_J03
         (364 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023690-1|AAY85090.1|   73|Drosophila melanogaster IP03783p pro...    97   5e-21
AE013599-231|AAF57398.1|   73|Drosophila melanogaster CG3450-PA ...    97   5e-21
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    27   7.4  
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    27   7.4  

>BT023690-1|AAY85090.1|   73|Drosophila melanogaster IP03783p
           protein.
          Length = 73

 Score = 97.5 bits (232), Expect = 5e-21
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = -2

Query: 219 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIXLKKWXT 73
           M+E+TCNDRLGKKVRVKCNPDDT+GDLKKLIAAQTGT+++KI LKKW T
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTKHEKIVLKKWYT 49



 Score = 38.7 bits (86), Expect = 0.002
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -3

Query: 65  KDHIKLADYEIHDGMNLEL 9
           KD I+L+DYEIHDGMNLEL
Sbjct: 52  KDPIRLSDYEIHDGMNLEL 70


>AE013599-231|AAF57398.1|   73|Drosophila melanogaster CG3450-PA
           protein.
          Length = 73

 Score = 97.5 bits (232), Expect = 5e-21
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = -2

Query: 219 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIXLKKWXT 73
           M+E+TCNDRLGKKVRVKCNPDDT+GDLKKLIAAQTGT+++KI LKKW T
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTKHEKIVLKKWYT 49



 Score = 38.7 bits (86), Expect = 0.002
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -3

Query: 65  KDHIKLADYEIHDGMNLEL 9
           KD I+L+DYEIHDGMNLEL
Sbjct: 52  KDPIRLSDYEIHDGMNLEL 70


>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p
           protein.
          Length = 1870

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 151 GIVRVAFNSNLLTESIIACYFKHFALKSALSF 246
           G+VR+ F +    ESI+   + HF LKS+ S+
Sbjct: 778 GLVRIVFAAFDRLESILKPSYDHFDLKSSRSY 809


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
           protein.
          Length = 1711

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 151 GIVRVAFNSNLLTESIIACYFKHFALKSALSF 246
           G+VR+ F +    ESI+   + HF LKS+ S+
Sbjct: 615 GLVRIVFAAFDRLESILKPSYDHFDLKSSRSY 646


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,795,818
Number of Sequences: 53049
Number of extensions: 198527
Number of successful extensions: 446
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)