Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_I20
(729 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.55
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 25 0.73
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 24 1.7
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 23 2.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 6.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 6.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.0
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 9.0
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 9.0
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.4 bits (53), Expect = 0.55
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -2
Query: 290 LVNAISPAYPLGNLHWEG--IEREATSDNVVIGVPTLEDLGVTLTHMEDQVP 141
L+ P + L W I REATSD V +G+ T+ L +P
Sbjct: 248 LIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLP 299
Score = 25.0 bits (52), Expect = 0.73
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 145 TWSSMCVKVTPKSSRVGTPITTLSEVASLSIPSQ*RFP 258
+W S + S RVG ITT+ ++++S+ S+ P
Sbjct: 262 SWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLP 299
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 25.0 bits (52), Expect = 0.73
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 290 LVNAISPAYPLGNLHWEG--IEREATSDNVVIGVPTL 186
L+ P L L W + REAT+D V +G+ T+
Sbjct: 217 LIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTV 253
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 35 LSKQFKLSQLVEGLVSGTLQADP 103
L K F L +V L+SG Q DP
Sbjct: 106 LLKMFILPLIVSSLISGMAQLDP 128
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 257 GNLHWEGIEREATSD 213
G + WEG+E+E D
Sbjct: 100 GGIFWEGLEKEVGDD 114
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 493 CRTSLRVS*MPRATTTLNVKSTKPLGQNATYLPI 392
C T+ + + TTT+N +T + + T +PI
Sbjct: 823 CVTTEQSVVVTNVTTTINTPTTSVISMSGTTVPI 856
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 6.8
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -3
Query: 667 WESVQSERNTQLPLLSEHQI 608
WE ++ + + + P S HQ+
Sbjct: 22 WEEIRRQASVEQPSFSVHQV 41
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 183 GFGRHLDAHGRPG 145
G+GRHL H + G
Sbjct: 209 GYGRHLPGHAQMG 221
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2
Query: 200 GVPTLEDLG 174
GVPTLE+LG
Sbjct: 209 GVPTLEELG 217
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 416 PKRYLLADLVDWFYKLMRKDEKW--GGYIRYDMKYD 315
P YLL D + Y RK+ W G ++ ++ Y+
Sbjct: 977 PTEYLLEDSMKQQYGKRRKEPPWLEGVHVTPELIYE 1012
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +2
Query: 584 KICLRNHRYLMLG**WQLGIPL*LHTLPNTCLFSKXTVS 700
+ CL H + L PL +H P T + K +S
Sbjct: 603 RYCLFGHNVTLANKFESLSEPLRIHVSPTTYILLKYPIS 641
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 665 PNTCLFSKXTVSSGQE 712
PNTC +VS+G+E
Sbjct: 592 PNTCKVIASSVSAGEE 607
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,682
Number of Sequences: 438
Number of extensions: 5230
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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