Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_I16
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 168 4e-42
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 168 4e-42
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 168 4e-42
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 168 4e-42
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 168 4e-42
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 168 4e-42
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 167 7e-42
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 167 7e-42
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 167 7e-42
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 167 7e-42
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 157 7e-39
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 7e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 84 1e-16
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 54 1e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 6e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.36
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.63
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 29 3.4
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.4
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.4
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.4
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.8
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 7.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.8
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 168 bits (408), Expect = 4e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 168 bits (408), Expect = 4e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 168 bits (408), Expect = 4e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 168 bits (408), Expect = 4e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 181 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIM 240
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 241 KCDIDIRKDLYANTVLSGGTTMYP 264
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 265 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 324
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 325 SIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 168 bits (408), Expect = 4e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 211 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIM 270
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 271 KCDIDIRKDLYANTVLSGGTTMYP 294
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 295 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 354
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 355 SIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 168 bits (408), Expect = 4e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 167 bits (406), Expect = 7e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 167 bits (406), Expect = 7e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 167 bits (406), Expect = 7e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 139 bits (337), Expect = 2e-33
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 167 bits (406), Expect = 7e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 225 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIM 284
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCD+DIRKDLYANTVLSGGTTM P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 2e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 157 bits (381), Expect = 7e-39
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
E E+A ASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIM
Sbjct: 224 ESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIM 283
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
KCDVDIRKDLYANTVLSGGT+M P
Sbjct: 284 KCDVDIRKDLYANTVLSGGTSMFP 307
Score = 140 bits (340), Expect = 7e-34
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
GIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 308 GIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 289 SIVHRKCF 266
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 87.8 bits (208), Expect = 7e-18
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDE 299
G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425
Query: 298 SGPSIVHRKC 269
SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = -1
Query: 674 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 510
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 509 ANTVLSGGTTM 477
+N ++GG ++
Sbjct: 353 SNVTVTGGNSL 363
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = -1
Query: 722 EQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 543
EQE ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+ E + I
Sbjct: 228 EQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQ 287
Query: 542 KCDVDIRKDLYANTVLSGGTTMXP 471
D+D R D Y + VLSGGTTM P
Sbjct: 288 ASDIDTRLDFYKHIVLSGGTTMYP 311
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -2
Query: 415 KIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 293
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = -1
Query: 707 TXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 528
T ++S++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD
Sbjct: 228 TKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVD 287
Query: 527 IRKDLYANTVLSGGTTM 477
+R+ LY+N VLSGGTT+
Sbjct: 288 LRQTLYSNIVLSGGTTL 304
Score = 74.5 bits (175), Expect = 7e-14
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 290
G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 307 GFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGA 366
Query: 289 SIVHRKCF 266
S +H++ F
Sbjct: 367 SAMHKRFF 374
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = -1
Query: 644 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMXP 471
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ P
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMP 485
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/54 (33%), Positives = 36/54 (66%)
Frame = -2
Query: 469 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 308
GIA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 486 GIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = -1
Query: 650 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTM 477
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTM 334
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 433 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 284
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = -1
Query: 650 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMXP 471
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 470 WNRRPYAKGNHSSRPID 420
R + S P +
Sbjct: 323 GFRERLEREVRSMLPAE 339
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = -1
Query: 650 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMXP 471
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 470 WNRRPYAKGNHSSRPID 420
R + S P +
Sbjct: 323 GFRERLEREVRSMLPAE 339
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 548 IMKCDVDIRKDLYANTVLSGGTTMXP 471
+ KC +D+RK L+ N +L+GG + P
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIP 223
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 371 PYGVLPLWRSNDLNLHCRWGESCD 442
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 371 PYGVLPLWRSNDLNLHCRWGESCD 442
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 371 PYGVLPLWRSNDLNLHCRWGESCD 442
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 684 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 565
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 684 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 565
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 642 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 529
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 642 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 529
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 642 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 529
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 642 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 529
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 642 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 529
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 207 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 299
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 310 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 209
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 207 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 299
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 391 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 230
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,104,144
Number of Sequences: 27780
Number of extensions: 337702
Number of successful extensions: 976
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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