Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_I12
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   2.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   3.0  
AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione S-tran...    23   9.1  
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        23   9.1  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 287 RSEDSRVCELHRKDIHHVCRCR 222
           RS D R+   HRK + HV  CR
Sbjct: 83  RSLDGRLQVSHRKGLPHVIYCR 104


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -1

Query: 508 ERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQK 398
           +RE+N+ LLE   +S ++    V  ++    ++S  K
Sbjct: 745 DREANFRLLEDAYQSAKKTLANVEKKLAEVKAKSSDK 781


>AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione
           S-transferase E6 protein.
          Length = 227

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 407 LPEENLRRLREGHRALRTRL 348
           +PEENL+R  EG + L   L
Sbjct: 127 IPEENLQRALEGLQRLERML 146


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -1

Query: 538 VSYGRLTFKY-ERESNYHLLESVQESLERRFGRVGGRIPVTP 416
           ++ G +   Y E+     + +S+ ++  + F  + GR P TP
Sbjct: 111 LTIGEVLLNYLEQALGRQMSDSLPDAFWKLFQTIAGRFPATP 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,058
Number of Sequences: 2352
Number of extensions: 11805
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)