Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_I10
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 130 7e-31
U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical p... 117 9e-27
AF144639-1|AAD44756.1| 552|Caenorhabditis elegans sphingosine-1... 29 2.3
AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine p... 29 2.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine r... 28 5.3
U88184-3|AAK31519.1| 648|Caenorhabditis elegans Hypothetical pr... 28 7.0
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 130 bits (315), Expect = 7e-31
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = -3
Query: 662 ELLRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNV 483
E+++ L+ LLE S DP++L VA +DIGEYVRHYPRGK ++EQ GK VM LL+ +DPNV
Sbjct: 376 EVVKILIKLLESSHDPLILCVASHDIGEYVRHYPRGKTVVEQYQGKAAVMRLLTAEDPNV 435
Query: 482 RYEALLAVQKLMVHNWEYLGKQLEKE 405
RY ALLAVQKLMVHNWEYLGKQL+ +
Sbjct: 436 RYHALLAVQKLMVHNWEYLGKQLDSD 461
>U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical
protein F52E1.10 protein.
Length = 451
Score = 117 bits (281), Expect = 9e-27
Identities = 54/84 (64%), Positives = 69/84 (82%)
Frame = -3
Query: 665 QELLRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPN 486
QELL+ LV +LEKS DP+VL VA +DIGE+VR+YPRGK +EQLGGK+ +M LL+ DPN
Sbjct: 368 QELLKLLVAMLEKSNDPLVLCVAAHDIGEFVRYYPRGKLKVEQLGGKEAMMRLLTVKDPN 427
Query: 485 VRYEALLAVQKLMVHNWEYLGKQL 414
VRY ALLA QKLM++NW+ LG ++
Sbjct: 428 VRYHALLAAQKLMINNWKDLGLEI 451
>AF144639-1|AAD44756.1| 552|Caenorhabditis elegans
sphingosine-1-phosphate lyase protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = -3
Query: 647 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 474
+VHL KS DP++ + Y + +R P + IE+ K +++ + DD + ++
Sbjct: 48 VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106
Query: 473 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 369
+ L + L + L K+ E + G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142
>AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine
phosphate lyase protein1 protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = -3
Query: 647 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 474
+VHL KS DP++ + Y + +R P + IE+ K +++ + DD + ++
Sbjct: 48 VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106
Query: 473 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 369
+ L + L + L K+ E + G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 343 VMSYKFYALAPTTVPACLSICSFSSCLPRYSQL*TISFCTASKASYRTFGSS*LRRYMTR 522
+ Y+ T VPAC+ CS S+C+ Q T S CT + S + + + + M R
Sbjct: 187 IQKYEITVEQETCVPACMPACS-SACV----QAVTCSTCTNNCPSICSQANC-IPQCMPR 240
Query: 523 CLP 531
CLP
Sbjct: 241 CLP 243
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 538 CSMMCLPRG*WRTYSPMS*QATASTTGS 621
CS + +P G TYSP S T+ T+G+
Sbjct: 1055 CSALTIPSGAQATYSPFSLSTTSFTSGT 1082
>AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine
receptor, class t protein5 protein.
Length = 353
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/83 (22%), Positives = 42/83 (50%)
Frame = +3
Query: 423 AEIFPVVNHKFLHGEQGFVPYIRIVVTQEVHDTLFTTKLFDDVFAARIVAHIFSDVIASD 602
AE+ P FL G++ F+ I +++ ++ ++FT + +F+ +++F +I +
Sbjct: 136 AEVDPHFPLAFLFGKRIFIIVIFVLLCYGIYVSVFTQPI---IFSPEYASYLFDPLIGKN 192
Query: 603 GEYDRIAALLEQVHQGAKQFLTT 671
++ + +L VH LTT
Sbjct: 193 PDFYQNYTIL--VHNAVTCVLTT 213
>U88184-3|AAK31519.1| 648|Caenorhabditis elegans Hypothetical
protein F36H5.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 194 IDVFLIKQSTFYV*LSFMNHNSI*ELFMNL*QHSINVTIATNYIFF*FTML 346
+DV L+ Q+T Y + +NH + E N + S+N +A+N F FT L
Sbjct: 492 LDVELV-QTTDYQRMVVLNHTKLVETRTNRVKFSLNDLLASNASFLQFTNL 541
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,998,842
Number of Sequences: 27780
Number of extensions: 306418
Number of successful extensions: 710
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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