Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_I08
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical ...   267   5e-72
U88166-2|AAO44911.1|  118|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81062-2|CAB02946.1|  269|Caenorhabditis elegans Hypothetical pr...    28   7.8  
L16685-2|AAY43982.1|  262|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical...    28   7.8  

>AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.5 protein.
          Length = 183

 Score =  267 bits (655), Expect = 5e-72
 Identities = 122/175 (69%), Positives = 148/175 (84%)
 Frame = -2

Query: 643 SLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRG 464
           ++F ++R+MN RQ  YQ L+F M+VSSALMIWKG+MV+TGS+SP+VVVLSGSMEPAF+RG
Sbjct: 8   AMFSEIRQMNIRQLFYQCLNFAMVVSSALMIWKGMMVITGSDSPVVVVLSGSMEPAFYRG 67

Query: 463 DLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDRG 284
           DLL LTN  E+PVRVG+I VFKVEGR+IPIVHRV+K+HEK+    K LTKGDNN VDDRG
Sbjct: 68  DLLLLTNDLEDPVRVGDITVFKVEGREIPIVHRVIKVHEKSADNTKILTKGDNNQVDDRG 127

Query: 283 LYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLAWLAIXX*GHRE 119
           LYA GQLWL++ DVVGR +G LPYVGMVTI MN+YPK K+AVLA+L +    H+E
Sbjct: 128 LYAPGQLWLSRTDVVGRTKGLLPYVGMVTIIMNDYPKLKYAVLAFLGLFVLLHKE 182


>U88166-2|AAO44911.1|  118|Caenorhabditis elegans Hypothetical
           protein M01A12.3 protein.
          Length = 118

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 179 IFIHIYGDHSNIWQKSSC 232
           +FIH++GDH N+ +   C
Sbjct: 32  VFIHLFGDHLNVLEDDEC 49


>Z81062-2|CAB02946.1|  269|Caenorhabditis elegans Hypothetical
           protein F15A4.2 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +3

Query: 522 LPVTTIKPFHIIKAEDTIIPKLNTWYMNCRLFIRRTSSNRLSNIVNL 662
           +P   ++PFH++     +I ++     N  + I RT+S ++  I  L
Sbjct: 1   MPRYIVRPFHLLNLPTVVISEVLNHLKNIDICILRTTSRKIRTIGKL 47


>L16685-2|AAY43982.1|  262|Caenorhabditis elegans Hypothetical
           protein ZC21.9 protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 179 IFIHIYGDHSNIWQKSSCTANHIFFS-EPQLALG 277
           IF+ ++GD SN   KSS T   + F+ EP  A G
Sbjct: 168 IFVEVHGDDSNTTTKSSPTLEFVQFTLEPPSADG 201


>AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7c protein.
          Length = 936

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 93  TSVSSRFCHSLCPHXXIASQASTANLNLGYSFIYMV 200
           +++ SRFCH+L       +QAS + L LG S +Y+V
Sbjct: 851 SAIYSRFCHTLGTIGWPVTQASVSVL-LGVSSLYLV 885


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,639
Number of Sequences: 27780
Number of extensions: 325352
Number of successful extensions: 787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)