Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_H07
(685 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 66 3e-12
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 62 7e-11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 54 2e-08
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 52 6e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 50 3e-07
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 47 3e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 47 3e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 46 4e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 44 2e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 42 8e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.002
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 36 0.005
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.16
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 30 0.36
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 28 1.1
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 2.5
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 2.5
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 27 3.3
SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G family|Schizosaccha... 26 4.4
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 26 4.4
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 26 5.8
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 25 7.7
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 7.7
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 7.7
SPAC31A2.02 |trm112||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 25 7.7
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 66.5 bits (155), Expect = 3e-12
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Frame = -3
Query: 569 CGACFLEPNSLRTHIKSHSKIETDYPCEV--CGKNLKSKYSKYLHVATVHEKKPTVNCY- 399
CG + P+ L H+++HS E + C+ C K K +H KP +C+
Sbjct: 30 CGKKYSRPSLLEQHLRTHSN-ERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP-FSCHY 87
Query: 398 -KCEASFLSYALRNKHLIEVHADKRTFAC--KLCDKVYNRRKTLMEHNRRIHLKIYRHQC 228
C+A F + +H IEVH + +AC + CD+ +++ + L H H + + C
Sbjct: 88 DGCDAQFYTQQHLERH-IEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPC 146
Query: 227 DL--CDQRFYLPSRLKEHM-ATHTGERNFRC--EFC--DKSYPRLQSLQEHIRSHSNERR 69
C+ RF +L+ H+ H ++ C E C + + + LQ HIR
Sbjct: 147 TYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIR---EAHV 203
Query: 68 YKCDLCNSAFTQNGSLKNHM 9
C +C F L++H+
Sbjct: 204 PSCSICGRQFKTAAHLRHHV 223
Score = 65.3 bits (152), Expect = 8e-12
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Frame = -3
Query: 398 KCEASFLSYALRNKHLIEVHADKRTFACKL--CDKVYNRRKTLMEHNRRIHLKIYRHQC- 228
+C + +L +HL H+++R F C C K + R+ L H +R H + C
Sbjct: 29 ECGKKYSRPSLLEQHL-RTHSNERPFVCDYTGCSKAFYRKSHLKIH-KRCHTNVKPFSCH 86
Query: 227 -DLCDQRFYLPSRLKEHMATHTGERNFRC--EFCDKSYPRLQSLQEHIRS-HSNERRYKC 60
D CD +FY L+ H+ H + + C E CD+ + + Q L+ HI + H++ Y C
Sbjct: 87 YDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPC 146
Query: 59 DL--CNSAFTQNGSLKNHM 9
C F L+NH+
Sbjct: 147 TYQDCELRFATKQKLQNHV 165
Score = 62.9 bits (146), Expect = 4e-11
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 20/234 (8%)
Frame = -3
Query: 650 ECGSVFPYFDALKKHMIDHFGTS--TCDI--CGACFLEPNSLRTHIKSHSKIETDYPCEV 483
ECG + L++H+ H CD C F + L+ H + H+ ++ + C
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP-FSCHY 87
Query: 482 CGKNLKSKYSKYL--HVATVHEKKPTVNCYK-CEASFLSYALRNKHLIEVHADKRTFACK 312
G + + ++L H+ + KP ++ C+ F + H+ H + C
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCT 147
Query: 311 L--CDKVYNRRKTLMEHNRRIHLKIYRHQC--DLC--DQRFYLPSRLKEHMA-THTGERN 153
C+ + ++ L H R H KI + C + C + F S+L+ H+ H
Sbjct: 148 YQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVPS-- 205
Query: 152 FRCEFCDKSYPRLQSLQEHIRSHSN---ERR-YKCDL--CNSAFTQNGSLKNHM 9
C C + + L+ H+ H ER+ Y C + C +FT++ +LK H+
Sbjct: 206 --CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHI 257
Score = 58.8 bits (136), Expect = 7e-10
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = -3
Query: 266 NRRIHLKIYRHQCDLCDQRFYLPSRLKEHMATHTGERNFRCEF--CDKSYPRLQSLQEHI 93
N R KI+ + C +++ PS L++H+ TH+ ER F C++ C K++ R L+ H
Sbjct: 15 NLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHK 74
Query: 92 RSHSNERRYKC--DLCNSAFTQNGSLKNHMK 6
R H+N + + C D C++ F L+ H++
Sbjct: 75 RCHTNVKPFSCHYDGCDAQFYTQQHLERHIE 105
Score = 58.8 bits (136), Expect = 7e-10
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 12/185 (6%)
Frame = -3
Query: 581 TCDICGACFLEPNSLRTHIKSHSKIETDYPC--EVCGKNLKSKYSKYLHVATVHEKKPTV 408
T + C CF + LR+HI + YPC + C +K HV HEK +
Sbjct: 116 TWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISY 175
Query: 407 NC--YKC--EASFLSYALRNKHLIEVHADKRTFACKLCDKVYN-----RRKTLMEHNRRI 255
+C C F ++ H+ E H +C +C + + R ++
Sbjct: 176 SCPHESCVGHEGFEKWSQLQNHIREAHVP----SCSICGRQFKTAAHLRHHVVLHQTTLE 231
Query: 254 HLKIYRHQCDLCDQRFYLPSRLKEHMAT-HTGERNFRCEFCDKSYPRLQSLQEHIRSHSN 78
K Y + C + F S LK+H++ H G F C+ C + LQ H+ +
Sbjct: 232 ERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTC 291
Query: 77 ERRYK 63
++ +K
Sbjct: 292 KKAHK 296
Score = 41.9 bits (94), Expect = 8e-05
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Frame = -3
Query: 656 CTECGS----VFPYFDALKKHMIDHFGTSTCDICGACFLEPNSLRTHI-KSHSKIETDYP 492
C EC S + + A H++ + T C F L+ H+ ++H KI Y
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPY--PCTYQDCELRFATKQKLQNHVNRAHEKI-ISYS 176
Query: 491 C--EVC-GKNLKSKYSKYL-HVATVHEKKPTVNCYKCEASFLSYALRNKHLIEVHA---- 336
C E C G K+S+ H+ H +C C F + A H++ +H
Sbjct: 177 CPHESCVGHEGFEKWSQLQNHIREAH----VPSCSICGRQFKTAAHLRHHVV-LHQTTLE 231
Query: 335 DKRTFACKL--CDKVYNRRKTLMEHNRRIHLKIYRHQCDLCDQRFYLPSRLKEHMATHT 165
+++T+ C + C K + R L +H IH CD C +F L+ H+ T
Sbjct: 232 ERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGT 290
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 62.1 bits (144), Expect = 7e-11
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = -3
Query: 221 CDQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDLCNSA 42
C++RF LK HM THT R F+C C KS+ R + H + H+ + + C CN
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 41 FTQNGSLKNHMK 6
F + +L H K
Sbjct: 637 FARMDALNRHYK 648
Score = 51.6 bits (118), Expect = 1e-07
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Frame = -3
Query: 539 LRTHIKSHSK-IETDYPCEVCGK--NLKSKYSKYLHVATVHEKKPTVNCYKCEASFLSYA 369
L TH S+ + + E+ GK N SK + YL V + ++N S S +
Sbjct: 498 LYTHFSHSSECLSVNQDTELLGKIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSSS 557
Query: 368 LRNKHLIEVHADKRTFACKL--CDKVYNRRKTLMEHNRRIHLKIYRHQCDLCDQRFYLPS 195
+ K + + C C+K + R L H H QC +C + F
Sbjct: 558 SKAK---SESKSQGNYVCTFAGCNKRFTRAYNLKSH-MNTHTNYRPFQCSICKKSFARQH 613
Query: 194 RLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRS 87
+ H HTG + F C C++ + R+ +L H +S
Sbjct: 614 DKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
Score = 31.9 bits (69), Expect = 0.089
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = -3
Query: 665 NLVCT--ECGSVFPYFDALKKHMIDH--FGTSTCDICGACFLEPNSLRTHIKSHSKIETD 498
N VCT C F LK HM H + C IC F + R H + H+ I+
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKA- 627
Query: 497 YPCEVCGK 474
+ C C +
Sbjct: 628 FACVTCNQ 635
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 54.0 bits (124), Expect = 2e-08
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = -3
Query: 221 CDQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDLCNSA 42
C++R ++ H+ TH +R +RC+ C + R L+ H+R H N R Y C+ C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 41 FTQNGSLKNH 12
F + +L H
Sbjct: 509 FNRLDALNRH 518
Score = 49.6 bits (113), Expect = 4e-07
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Frame = -3
Query: 272 EHNRRIHLKI-YRHQCDLCDQRFYLPSRLKEHMAT-HTG---ERNFRCEF--CDKSYPRL 114
EH+ + ++I Y H+C Q + E MA+ + G + + C + C+K R
Sbjct: 398 EHDSKPPVRISYDHRCKTRKQSTRICRIPPETMASLYCGPEADGKYVCLYNGCNKRIARK 457
Query: 113 QSLQEHIRSHSNERRYKCDLCNSAFTQNGSLKNHMK 6
+++ HI++H ++R Y+CDLC + F ++ LK H++
Sbjct: 458 YNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR 493
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = -3
Query: 287 RKTLMEHNRRIHLKIYRHQCDLCDQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQS 108
RK +E + + HL ++CDLC F LK H+ H R + CE C K + RL +
Sbjct: 456 RKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDA 514
Query: 107 LQEH 96
L H
Sbjct: 515 LNRH 518
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 578 CDICGACFLEPNSLRTHIKSHSKIETDYPCE 486
CD+C A F+ + L+ H++ H Y CE
Sbjct: 475 CDLCKAGFVRHHDLKRHLRIHEN-GRPYVCE 504
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 52.4 bits (120), Expect = 6e-08
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = -3
Query: 197 SRLKEHMATHTGERNFRCEF--CDKSYPRLQSLQEHIRSHSNERRYKCDLCNSAFTQNGS 24
++ K+ A G+ ++C+F C KS+ R + + H RSH+N + + C C+S+FT++
Sbjct: 2 TKAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDV 61
Query: 23 LKNHM 9
L H+
Sbjct: 62 LNRHV 66
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 239 RHQCDL--CDQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHI 93
R++CD C + F + H +HT + F C C S+ R L H+
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/50 (26%), Positives = 19/50 (38%)
Frame = -3
Query: 395 CEASFLSYALRNKHLIEVHADKRTFACKLCDKVYNRRKTLMEHNRRIHLK 246
C SF +H H + + F C C + R L H + H+K
Sbjct: 24 CTKSFTRKEHARRHF-RSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -3
Query: 224 LCDQRFYLPSRLKEHMATHT-GERNFRCEF--CDKSYPRLQSLQEHIRSHSNERRYKCDL 54
+ ++ + LK+ H G+ F C + C KS+ R + L+ H R+H N + + C
Sbjct: 1 MSNEESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSF 60
Query: 53 CNSAFTQNGSLKNHMK 6
CN AF ++ L H++
Sbjct: 61 CNRAFARSDVLNRHVQ 76
Score = 30.7 bits (66), Expect = 0.20
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -3
Query: 395 CEASFLSYALRNKHLIEVHADKRTFACKLCDKVYNRRKTLMEHNRRIHLK 246
C SF +H H + + F+C C++ + R L H +++HL+
Sbjct: 33 CPKSFTRKEHLRRHE-RTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
Score = 28.7 bits (61), Expect = 0.83
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = -3
Query: 536 RTHIKSHSKIETDYPCEVCGKNLKSKYSKYLHVATVHEKKPTVNCYKCEASFLSYALRNK 357
R H + YP C K+ K H T HE +C C +F + N+
Sbjct: 17 RAHRLGDPRFYCTYPD--CPKSFTRKEHLRRHERT-HENVKAFSCSFCNRAFARSDVLNR 73
Query: 356 HLIEVHADKRTFA 318
H+ ++H K+ +
Sbjct: 74 HVQQMHLQKQNLS 86
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 46.8 bits (106), Expect = 3e-06
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 236 HQCDLCDQRFYLPSRLKEHMATHTGERNFRCEF--CDKSYPRLQSLQEHIRSHSN 78
++C LC + FY H+ THTGE+ C F C K + R L H R H+N
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 158 RNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDL--CNSAFTQNGSLKNHMK 6
R ++C C K++ RL+ HIR+H+ E+ + C C F+++ L H +
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
Score = 30.3 bits (65), Expect = 0.27
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = -3
Query: 329 RTFACKLCDKVYNRRKTLMEHNRRIHLKIYRHQCDL--CDQRFYLPSRLKEHMATHTGER 156
R + C LC K + R + H R H H C C +RF L H HT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRH-IRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNAN 82
Query: 155 NFR 147
+ R
Sbjct: 83 SRR 85
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -3
Query: 239 RHQCDLCDQRFYLPSRLKEHMATHTGERNFRCEF--CDKSYPRLQSLQEHIRSH 84
R++C C Q F PS LK H +HTGER F C++ C K++ +++ H R H
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 152 FRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDL--CNSAFTQNGSLKNHMK 6
+RC C + + R SL+ H SH+ ER + CD C AF +++ H +
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQR 518
Score = 30.3 bits (65), Expect = 0.27
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -3
Query: 656 CTECGSVFPYFDALKKHMIDHFGTS--TCDI--CGACFLEPNSLRTHIKSH 516
CTEC F +LK H H G CD CG F +++R H + H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 578 CDICGACFLEPNSLRTHIKSHSKIETDYPCEV--CGK--NLKSKYSKYLHV 438
C C F P+SL+ H SH+ E + C+ CGK N++S ++ +
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTG-ERPFVCDYAGCGKAFNVRSNMRRHQRI 519
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.4 bits (105), Expect = 4e-06
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -3
Query: 200 PSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRS-HSNERRYKCDLCNSAFTQNGS 24
PS K + G ++F C C K + R + L+ HIRS H++E+ + C +C F++ +
Sbjct: 407 PSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDN 465
Query: 23 LKNH 12
L+ H
Sbjct: 466 LRQH 469
Score = 40.3 bits (90), Expect = 3e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -3
Query: 230 CDLCDQRFYLPSRLKEHMAT-HTGERNFRCEFCDKSYPRLQSLQEHIRSHSN-ERRYKCD 57
C C ++F L+ H+ + HT E+ F C C K + R +L++H R H N R C
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLACF 483
Query: 56 LCNSAFTQNGS 24
S + +G+
Sbjct: 484 FQPSGYYSSGA 494
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -3
Query: 329 RTFACKLCDKVYNRRKTLMEHNRRIHLKIYRHQCDLCDQRFYLPSRLKEHMATH-TGERN 153
++F C C K + R + L H R +H C +C +RF L++H H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPR 479
Query: 152 FRCEFCDKSY 123
C F Y
Sbjct: 480 LACFFQPSGY 489
Score = 35.1 bits (77), Expect = 0.010
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 404 CYKCEASFLSYALRNKHLIEVHADKRTFACKLCDKVYNRRKTLMEHNR 261
C +C F +H+ +H ++ F C +C K ++RR L +H R
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHER 471
Score = 29.5 bits (63), Expect = 0.47
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Frame = -3
Query: 668 ENLVCTECGSVFPYFDALKKHMIDHFGTS----TCDICGACFLEPNSLRTHIKSHSKIET 501
++ VC EC F + L++H I TS C ICG F ++LR H + H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRH-IRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS- 477
Query: 500 DYPCEVCGKNLKSKYSKYLHVATVHEKKP 414
P C YS A V +KP
Sbjct: 478 --PRLACFFQPSGYYSSGAPGAPVQPQKP 504
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 44.4 bits (100), Expect = 2e-05
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 236 HQCDLCDQRFYLPSRLKEHMATHTGERNFRCEF--CDKSYPRLQSLQEHIRSH 84
++C C + F+ H+ +HTGE+ F C + C K + R L H+R+H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 41.9 bits (94), Expect = 8e-05
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 158 RNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDL--CNSAFTQNGSLKNHMK 6
+++ C FC + + R + HIRSH+ E+ ++C C FT+ L H++
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR 54
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 41.9 bits (94), Expect = 8e-05
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 158 RNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKC 60
+ + CE C +++ RL+ L+ HIRSH+NE+ + C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 34.7 bits (76), Expect = 0.013
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 248 KIYRHQCDLCDQRFYLPSRLKEHMATHTGERNFRCEFCD 132
K+ ++ C+ C + F LK H+ +HT E+ F C D
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 230 CDLCDQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHSNER 72
CD C +RF L H A H+ C +C+ R L+ HI+ N++
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 33.9 bits (74), Expect = 0.022
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = -3
Query: 605 MIDHFGTSTCDICGACFLEPNSLRTHIKSHSKIETDYPCEVCGKNLKSKYSKYLHVATVH 426
+ID CD C F +L H HSK E PC C K K H+ H
Sbjct: 24 LIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAE-PIPCPYCEIKCKRKDLLKRHIQRFH 82
Query: 425 EKKPTV 408
K +
Sbjct: 83 NDKSVI 88
Score = 33.5 bits (73), Expect = 0.029
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 161 ERNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDLCNSAFTQNGSLKNHMK 6
+R F C+ C K + R ++L H HS C C + LK H++
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 332 KRTFACKLCDKVYNRRKTLMEHNRRIHLKIYRHQCDLCDQRFYLPSRLKEHM 177
KR F C C K + R + L H + H K C C+ + LK H+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHI 78
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 497 YPCEVCGKNLKSKYSKYLHVATVHEKKPTVNCYKCEASFLSYALRNKHLIEVHADK 330
+PC+ C K + H A H K + C CE L +H+ H DK
Sbjct: 31 FPCDQCAKRFTRHENLTRHKAC-HSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -3
Query: 191 LKEHMATHTGERNFRCEF--CDKSYPRLQSLQEHIRS 87
L H+ +HTGE+ F C CD+S+ R +L +H+R+
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 33.5 bits (73), Expect = 0.029
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = -3
Query: 110 SLQEHIRSHSNERRYKCDL--CNSAFTQNGSLKNHMK 6
+L H+RSH+ E+ + C + C+ +FT++ +L HM+
Sbjct: 92 ALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.1 bits (67), Expect = 0.16
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = -3
Query: 308 CDKVYNRRKTLMEHNRRIHLKIYRHQCDLCDQRFYLPSRLKEHMATHTGERNFRCEFCDK 129
CDK Y + L H K++ H + P+ + H + +RCE C K
Sbjct: 357 CDKAYKNQNGLKYH------KLHGHCSPITTPT---PAPIP-HQGFVVENKPYRCEVCSK 406
Query: 128 SYPRLQSLQEHIRSHSN 78
Y L L+ H R+HS+
Sbjct: 407 RYKNLNGLKYH-RTHSH 422
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 29.9 bits (64), Expect = 0.36
Identities = 24/114 (21%), Positives = 47/114 (41%)
Frame = -3
Query: 398 KCEASFLSYALRNKHLIEVHADKRTFACKLCDKVYNRRKTLMEHNRRIHLKIYRHQCDLC 219
+ F R + + D++ + + D+ Y+RR ++R + YRH+
Sbjct: 314 RIHVDFSQSVARYRQYYNSNRDRKRSSSRSDDREYHRRSD-GRYDRSNYRDDYRHRRKER 372
Query: 218 DQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCD 57
D R S E + + G+ + + ++ +H+R S ERRY+ D
Sbjct: 373 DHRDDQSSFRNERFSNYYGDDR---SYHKRRNTGNKNCDDHLRDKSPERRYRYD 423
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 314 KLCDKVYNRRKTLMEHNRRIHLKIYR-HQCDLC-DQRFY 204
++C+ V++R L+ H IH K +C++C DQR +
Sbjct: 583 EICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHF 621
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 581 TCDICGACFLEPNSLRTHIKS-HSKIETDYPCEVCG 477
T +IC F L H + H+K + CE+CG
Sbjct: 581 TGEICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICG 616
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 137 CDKSYPRLQSLQEHIRSHSNERRYKCDL--CNSAFTQNGSLKNHMK 6
CD P + + H+R H N R C++ C F+ + H++
Sbjct: 1040 CDMVLPS-EEFEMHLRGHLNNIRLNCEVSNCKKCFSNYEDMFKHLQ 1084
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 281 TLMEHNRRIHLKIYRHQ-CDLCDQRFYLPSRLKEHMAT 171
++ + N + K +Q C++C+++FY HMA+
Sbjct: 54 SIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMAS 91
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = -3
Query: 173 THTGERNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDLCNSAFTQNGSLKNHM 9
+++ + NF+ EF DK+Y + Q I++ SNE Y D ++AF Q ++ M
Sbjct: 342 SNSSQYNFKWEFDDKTYGPYTASQ--IQAWSNE-GYFTDAKHAAFIQLANMDEWM 393
>SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 496
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -3
Query: 335 DKRTFACKLCDKVYNRRKTLMEHNRRIHLKIYRHQCDLCDQRFYLPSRLKEHMATHTGER 156
+ TF + DK+ +R KTLM ++ HL Q + PS ++ ++
Sbjct: 172 ENATFVRLIVDKLNDREKTLMIQEKKNHLIHSLRQLLAFSEINDFPSEIRSYLEFILSNL 231
Query: 155 NFRC-EFCDKSYPRLQSLQE 99
+ C C K + +L E
Sbjct: 232 DLECLTLCLKIIKGILTLDE 251
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 668 ENLVCTECGSVFPYFDALKKHMIDHFGTSTCDIC 567
ENL CT CG +F F L + T C +C
Sbjct: 214 ENLSCTPCGHIFCNFCILSA-LGTTAATQKCPVC 246
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -3
Query: 587 TSTCDICGACFLEPNSLRTHIKSHSKIET 501
T CD C F++ + L H +++ ++ET
Sbjct: 138 TFRCDKCDMMFVKQSGLTNHKRTYHQVET 166
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 326 TFACKLCDKVYNRRKTLMEHNRRIH 252
TF C CD ++ ++ L H R H
Sbjct: 138 TFRCDKCDMMFVKQSGLTNHKRTYH 162
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 182 HMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHSNERR 69
H + F C +C K + + LQEH S S+ R
Sbjct: 410 HSSPLLSRSRFICCYCTKPFLSISKLQEHESSCSHVER 447
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 636 FSVFRRSKEAHDRSFRDVDMRYLRGML 556
F+V R+ + AH S+R V +R LR L
Sbjct: 39 FTVERKRRRAHSVSYRVVSVRDLRASL 65
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = -3
Query: 203 LPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHSNERRYKCDLCNS 45
L +++ M + + C FC+K + L L +NE + C++C +
Sbjct: 119 LVKTVEDRMRNDFDSKGYVCPFCNKKFSSLDVLS----LVTNEGTFACNVCGT 167
>SPAC31A2.02 |trm112||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 126
Score = 25.4 bits (53), Expect = 7.7
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -3
Query: 677 LTLENLVCTECGSVFPYFDALKKHMI 600
+T +VC CG V+P F+ + ++
Sbjct: 96 ITEGKMVCGNCGHVYPIFEGIPNMLL 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,750,845
Number of Sequences: 5004
Number of extensions: 58184
Number of successful extensions: 291
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -