Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_H06
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1609 + 34760576-34760688,34760781-34760948,34761566-347616...    29   4.5  

>04_04_1609 +
           34760576-34760688,34760781-34760948,34761566-34761634,
           34762125-34762247,34762296-34762501,34762723-34762729,
           34762961-34763006,34763092-34763151,34763249-34763317,
           34763790-34763873,34764178-34764263,34764859-34764949,
           34765029-34765109,34765191-34765265,34765392-34765526
          Length = 470

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = +2

Query: 20  MSKALVVIS---NLNNLH-PSLSASLFCGSRVIN*ALLLSAAKKTVLNRMQNVYVLLHNM 187
           M+KA V IS   N  N+H PS     F   +++    LL+A  + + +R ++ + L+H+ 
Sbjct: 151 MTKAYVCISYCLNATNVHSPSKGTHSFLYGKIV----LLAAIDQLISSRERDKFQLIHDE 206

Query: 188 IIKCGKNKNKA*QIFEIAKGYY--GASPAL 271
                 ++ K   I  +A G Y  G +P L
Sbjct: 207 NFSARSSEFKVHLISSLAFGIYLDGEAPRL 236


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,705,377
Number of Sequences: 37544
Number of extensions: 245121
Number of successful extensions: 440
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)