Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_H04
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0089 - 6668179-6668316,6668386-6668565,6668648-6668729,666... 231 6e-61
06_01_0035 + 358669-359007,359458-359617,359723-360582 53 3e-07
05_07_0334 - 29358823-29360247 48 8e-06
04_04_0638 - 26877640-26877825,26877954-26878160,26878866-268789... 48 1e-05
02_05_0138 - 26190110-26191038,26191123-26191221,26191388-261915... 33 0.24
11_02_0028 + 7517196-7517206,7517256-7517312,7517423-7517503,751... 31 0.72
11_05_0015 + 18403367-18403729,18404500-18404565,18405121-184052... 30 1.7
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 30 2.2
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 29 2.9
01_05_0012 + 17147764-17148141,17148316-17148465,17149360-171497... 29 2.9
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 29 5.1
10_07_0007 - 11768692-11768730,11768960-11769248,11769331-117695... 28 6.7
07_03_0528 + 19086835-19087363,19087514-19087539,19087753-190880... 28 6.7
03_02_0367 + 7834072-7834479,7834555-7834779,7834858-7835082,783... 28 6.7
04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925 28 8.9
>02_02_0089 -
6668179-6668316,6668386-6668565,6668648-6668729,
6669317-6669405,6669503-6669580,6670502-6670559,
6670727-6670956,6671174-6671318,6671417-6671458,
6671681-6671853
Length = 404
Score = 231 bits (564), Expect = 6e-61
Identities = 106/207 (51%), Positives = 149/207 (71%)
Frame = -3
Query: 730 HEQIXVYGDDVEVDYRGYEVSVXNFIRXXTGRVPPDTPRSKQLLTDEGSNILIYLTGHGG 551
+ Q+ +YGD+VEVDYRGYEV+V NF+R TGR PRSK+LL+DEGS+IL+Y+TGHGG
Sbjct: 109 NHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHESAVPRSKRLLSDEGSHILLYMTGHGG 168
Query: 550 DGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATASS 371
D FLKFQDSEE+ S +LADA++QM +K R+ E+ ++DTCQA++++ + SP +L SS
Sbjct: 169 DEFLKFQDSEELQSHDLADAVKQMKEKHRFKELLIMVDTCQAATLFSQLQSPGVLTIGSS 228
Query: 370 LVGEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLSTVGV 191
+ GE+S SHH+DS IGV ++DR+T+Y L F E ++ S +++ S LST
Sbjct: 229 MKGENSYSHHLDSDIGVSVVDRFTFYTLAFFEKLNMYSNASLNSLFNSYNPSMLLSTAYY 288
Query: 190 RKDLFNRDPSKVPITDFFGSVRPVILT 110
R DL+ R ++VP+T+FFGSV I T
Sbjct: 289 RMDLYERPLNEVPVTNFFGSVMNTIHT 315
>06_01_0035 + 358669-359007,359458-359617,359723-360582
Length = 452
Score = 52.8 bits (121), Expect = 3e-07
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 6/180 (3%)
Frame = -3
Query: 700 VEVDYRGYEVSVXNFIRXXTGRVPPDTPRSKQLLTDEGSN--ILIYLTGHGGDGFLKFQD 527
V DY G +V+ NF+ G+ T + G N I +Y + HG G++
Sbjct: 111 VPKDYNGNDVNKNNFLAVLLGKKSALTGAGSGKVISSGPNDHIFVYYSDHGSPGYVCMPS 170
Query: 526 SEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPN---ILATASSLVGED 356
+ + +L+ AL+ Y + ++ C++ SM+E P+ + A +S E+
Sbjct: 171 GGNLHANDLSQALKNKNAAGAYKNLVVYVEACESGSMFEGQLLPSNIGVYAMTASNATEN 230
Query: 355 SLSHHVDS-AIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDL 179
S + + D+ + D ++ +E + P T+ + + K LS V DL
Sbjct: 231 SWATYCDTPEYNTCLGDLFSVAWMEDADARRPGDPETLGQLYDIVAKRTNLSHVSRYGDL 290
>05_07_0334 - 29358823-29360247
Length = 474
Score = 48.0 bits (109), Expect = 8e-06
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = -3
Query: 700 VEVDYRGYEVSVXNFIRXXTGRVPPDTPRSKQLLTDEGSN--ILIYLTGHGGDGFLKF-Q 530
V DY G +V+V NF+ G T + G N + +Y HGG G L
Sbjct: 111 VPKDYTGDDVNVNNFLAVLLGNRSALTGSGSGKVVASGPNDHVFVYYADHGGPGVLSMPA 170
Query: 529 DSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNI--LATASSLVGED 356
D E + + +L AL++ Y + ++ C++ S++E +I AT +S E
Sbjct: 171 DGEYLYADDLVKALKKKHAGGGYKSLVVYVEACESGSIFEGLLPSDISVYATTASNAEES 230
Query: 355 S 353
S
Sbjct: 231 S 231
>04_04_0638 -
26877640-26877825,26877954-26878160,26878866-26878925,
26879229-26879435,26879501-26879549,26880138-26880337,
26880425-26880510,26880585-26880741,26880920-26881084,
26881817-26882053
Length = 517
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Frame = -3
Query: 700 VEVDYRGYEVSVXNFIRXXTGRVPPDTPRSKQLLTDE-GSNILIYLTGHGGDGFLKFQDS 524
V DY G++V+ NF G T S +++ + +I IY + HGG G L +
Sbjct: 132 VPKDYTGHQVTTENFFAVLLGNKTAVTGGSGKVIDSKPEDHIFIYYSDHGGPGVLGMPNL 191
Query: 523 EEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNI---LATASSLV 365
+ + + L++ Y+++ ++ C++ S++E N+ + TAS+ V
Sbjct: 192 PYLYAGDFIKVLQKKHASNSYSKMVIYVEACESGSIFEGLMPENLNIYVTTASNAV 247
>02_05_0138 -
26190110-26191038,26191123-26191221,26191388-26191518,
26191622-26191756,26191836-26191933,26192747-26192919,
26193027-26193411
Length = 649
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 553 GDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATA 377
GDG F +T++ L + + KK +E F+I Q + K Y PN LA A
Sbjct: 312 GDGLYHFIKVTGITAKSLHERSNRRHAKKATDEDTFVIADMQRDEFFNKDYIPNWLAYA 370
>11_02_0028 +
7517196-7517206,7517256-7517312,7517423-7517503,
7518009-7518108,7518454-7518507,7519045-7519115,
7519248-7519455,7519647-7519700,7519934-7520025,
7520090-7520285,7521158-7521339,7521429-7521496,
7522848-7522920,7523010-7523071,7523155-7524079,
7524843-7525133,7525601-7525871
Length = 931
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 544 FLKFQDSEEVTSQEL-ADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNIL 386
+ + D + + S + AD L W K +F I+D +A S EK YS N++
Sbjct: 722 YFNYDDGDNIMSASIHADQLAGQWYAKACG-LFPIVDKDKAESALEKIYSFNVM 774
>11_05_0015 +
18403367-18403729,18404500-18404565,18405121-18405234,
18406109-18406297,18406335-18406667,18406708-18406743,
18407806-18407919,18408506-18408999,18409293-18409716
Length = 710
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 427 ASSMYEKFYSPNILATASSLVGEDSLSHHVDSAIGVYIIDRY 302
A + Y S N ++ A++L G+ SLS HV SA G Y Y
Sbjct: 506 AHTAYSSLPSANNISMANNLYGQQSLSDHV-SATGYYTAPYY 546
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -1
Query: 324 VYTSLIDTHTMCWSFWKMFTLTAKGLCRNFWLYVRKVLAYRQWEYEKI 181
+ +++DT +C +W LTA + + +KV + +WE +K+
Sbjct: 320 IVNAMLDTTGLCKEWWGEAVLTACYVLNKIPMKHKKVTPFEEWERKKL 367
>03_06_0766 -
36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 38 HLYLGFI-LSLFLSFWCLYNIYRICCQDH 121
H Y G + +S +L WCLY I R+C H
Sbjct: 525 HHYAGNVAVSGYLESWCLYGITRLCIVMH 553
>01_05_0012 +
17147764-17148141,17148316-17148465,17149360-17149729,
17149898-17150015,17150121-17150226,17150326-17150418,
17150498-17150593,17151169-17151891,17152012-17152160,
17153434-17153520,17153541-17153625
Length = 784
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 715 VYGDDVEVDYRGYEVSVXNFIRXXTGRVP-PDTPRSKQLLTDEGSNILIYLTGHG 554
++G+++ D + + + + +P P P +KQL +D GS++LI T G
Sbjct: 344 IFGNEMVADGSNFLSASSDLVDTTVQSIPFPHIPLNKQLSSDHGSSLLINETSGG 398
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = -3
Query: 553 GDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATAS 374
GD D++ L D ++M + E+ +++ + ++Y+K P LAT
Sbjct: 378 GDARETIMDAQNALGDILLDDGDRMVNALQA-ELLRLLEYMETQALYDKLGHPYALATII 436
Query: 373 SLVGEDSLSHHVDSAIGVYIIDRYTYYVLE---FLENVH---PNSKRTMSEFLAVCPKSA 212
S + + + I +Y+ R Y+ + F EN P++ + + +A P +A
Sbjct: 437 SHRRQRAAGRGDEEVISLYVTPRMIAYLAQAKKFEENPEAPVPSADEDVKQEMAANPLAA 496
Query: 211 CLSTVG 194
+ +G
Sbjct: 497 ISAPLG 502
>10_07_0007 -
11768692-11768730,11768960-11769248,11769331-11769501,
11769580-11769785
Length = 234
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 364 GEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLSTV 197
G D+L H D + I D+ +YV + ++ +T++EF A+ + C +TV
Sbjct: 179 GHDTLIHKKDFPVKQQIGDQCGFYVCHNMRLLYREKVKTLAEFEAM--MNTCYATV 232
>07_03_0528 +
19086835-19087363,19087514-19087539,19087753-19088064,
19088152-19089038,19089370-19089658,19089744-19089782,
19089888-19089926
Length = 706
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 364 GEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLS 203
G D+L H D + I+D+ ++V + ++ +T++EF KS S
Sbjct: 638 GHDTLIHKKDFPVKQQIVDQCGFHVCHNMRLLYREKVKTLAEFEGTITKSLSTS 691
>03_02_0367 +
7834072-7834479,7834555-7834779,7834858-7835082,
7835333-7836219,7836298-7836468,7836551-7836839,
7836925-7836963,7837069-7837107
Length = 760
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -3
Query: 367 VGEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKS 215
+G D+L H D + I D+ +YV + ++ + +T++EF KS
Sbjct: 691 IGHDTLIHKKDFPVKQQIGDQCRFYVCHNMRLLYRDKVKTLAEFEGTIIKS 741
>04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925
Length = 962
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -3
Query: 541 LKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATA 377
LK + E ++ + L+ +W ++ YN+I QAS + S ++ A A
Sbjct: 266 LKEKFKENISDRRCLIVLDDVWDREAYNQIHDAFQNLQASRIIITTRSKHVAALA 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,779,586
Number of Sequences: 37544
Number of extensions: 349368
Number of successful extensions: 824
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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