Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_H04
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 232 2e-61
Z77653-3|CAB01126.1| 462|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z75551-5|CAA99935.1| 462|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF067448-1|AAF21773.1| 187|Caenorhabditis elegans hemoglobinase... 61 7e-10
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 33 0.28
Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68336-5|CAA92740.3| 442|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80026-2|AAY86280.1| 122|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 28 6.0
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 28 7.9
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 28 7.9
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 232 bits (568), Expect = 2e-61
Identities = 111/199 (55%), Positives = 146/199 (73%), Gaps = 2/199 (1%)
Frame = -3
Query: 715 VYGDDVEVDYRGYEVSVXNFIRXXTGRVPPDTPRSKQLLTDEGSNILIYLTGHGGDGFLK 536
+YG DVEVDYRG EV+V +FIR TGR P TPRSK+LLTD SN+LIYLTGHGGD F+K
Sbjct: 104 LYGSDVEVDYRGEEVTVESFIRVLTGRHHPATPRSKRLLTDHQSNVLIYLTGHGGDSFMK 163
Query: 535 FQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATASSLVGED 356
FQDSEE+T+ +LA A++ M++ RY+E+ I D+C+++SMYE SPN+L+ +SSL E+
Sbjct: 164 FQDSEELTNVDLAYAIQTMFEDNRYHEMLVIADSCRSASMYEWIDSPNVLSLSSSLTHEE 223
Query: 355 SLSHHVDSAIGVYIIDRYTYYVLEFL--ENVHPNSKRTMSEFLAVCPKSACLSTVGVRKD 182
S S+ VD+ IGVY+IDRYT+Y + FL E NS M +++ CP CLS GVRKD
Sbjct: 224 SYSYDVDTDIGVYVIDRYTHYTVNFLTKEVKALNSSANMQDYIDSCPARKCLSNTGVRKD 283
Query: 181 LFNRDPSKVPITDFFGSVR 125
+ +D +V +TDFFGS R
Sbjct: 284 HYPKDVKRVRVTDFFGSSR 302
>Z77653-3|CAB01126.1| 462|Caenorhabditis elegans Hypothetical
protein T28H10.3 protein.
Length = 462
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -3
Query: 700 VEVDYRGYEVSVXNFIRXXTGRVPP-DTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDS 524
+++DY+G V+ NF+ G D + L T++ + +Y T HG G + F D
Sbjct: 113 LKIDYKGASVTPENFLNVLKGNASGIDGGNGRVLETNDNDRVFVYFTDHGAVGMISFPDG 172
Query: 523 EEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEK 407
+T ++L D L M + K+Y+++ F ++ C++ SM+E+
Sbjct: 173 I-LTVKQLNDVLVWMHKNKKYSQLTFYLEACESGSMFEE 210
>Z75551-5|CAA99935.1| 462|Caenorhabditis elegans Hypothetical
protein T28H10.3 protein.
Length = 462
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -3
Query: 700 VEVDYRGYEVSVXNFIRXXTGRVPP-DTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDS 524
+++DY+G V+ NF+ G D + L T++ + +Y T HG G + F D
Sbjct: 113 LKIDYKGASVTPENFLNVLKGNASGIDGGNGRVLETNDNDRVFVYFTDHGAVGMISFPDG 172
Query: 523 EEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEK 407
+T ++L D L M + K+Y+++ F ++ C++ SM+E+
Sbjct: 173 I-LTVKQLNDVLVWMHKNKKYSQLTFYLEACESGSMFEE 210
>AF067448-1|AAF21773.1| 187|Caenorhabditis elegans
hemoglobinase-type cysteine proteinaseprotein.
Length = 187
Score = 61.3 bits (142), Expect = 7e-10
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = -3
Query: 700 VEVDYRGYEVSVXNFIRXXTGRVPP-DTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDS 524
+++DY+G + NF+ G D + L T++ + +Y T HG G + F D
Sbjct: 67 LKIDYKGASETPENFLNVLKGNASGIDGGNGRVLETNDNDRVFVYFTDHGAVGMISFPDG 126
Query: 523 EEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEK 407
+T ++L D L M + K+Y+++ F ++ C++ SM+E+
Sbjct: 127 I-LTVKQLNDVLVWMHKNKKYSQLTFYLEACESGSMFEE 164
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 2 SLHRQLWHIVPFHLYLGFILSLFLSFWCLYNIY 100
S HR L+ VPF+ +I S F+SF +YN++
Sbjct: 32 SFHRLLYFYVPFNSKYYYIWSFFVSFGVMYNMF 64
>Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical
protein B0462.1 protein.
Length = 548
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/95 (22%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Frame = -3
Query: 514 TSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPN--ILATASS----LVGEDS 353
++Q+ A+ L++ ++ N++F+I+ S + K +SP +++ S+ L D
Sbjct: 354 SNQQKAEILKERMEEFLTNDVFYIV-VFDCKSFFTKLFSPYAYVISCDSNSGNVLKSIDR 412
Query: 352 LSHHV--DSAIGVYIIDRYTYYVLEFLENVHPNSK 254
HV ++G+ + YT +++F+ P+S+
Sbjct: 413 GECHVWIYRSVGLNTYENYTTRMIDFMRTFEPSSQ 447
>Z68336-5|CAA92740.3| 442|Caenorhabditis elegans Hypothetical
protein F22B3.8 protein.
Length = 442
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -3
Query: 325 GVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRD 167
GV+++ + V EF EN SK ++ E L C S+C K L +RD
Sbjct: 230 GVFLLKKPIMLVSEFCENYLQKSKVSVDEKLRFCLGSSCGLEYIHFKGLIHRD 282
>U80026-2|AAY86280.1| 122|Caenorhabditis elegans Hypothetical
protein EGAP9.4 protein.
Length = 122
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 351 FLIMLIQLLVYTSLIDTHTMCWSFWKMFTLTAKGLCRNFWL 229
F I I L V +L D H CWS + + + L RNF L
Sbjct: 25 FEIDAITLKVNETLWDKHRRCWSLFVQYYVKKLVLNRNFLL 65
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 286 EFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFF 137
E E HP + LAV P+++ ++L + DP+K PI DF+
Sbjct: 565 ELSEPFHP-----FEQLLAVLPEASADCLPRPLRELMSSDPAKSPICDFY 609
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = -3
Query: 289 LEFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFGSVRPVIL 113
LE+L +H N +++ + C + V++D+ + K + D G V PV++
Sbjct: 75 LEYLSIIHSNCMEALTQLVDACTAFGINHDITVQEDVNRFEDFKRKLRDPEGLVIPVVI 133
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = -3
Query: 289 LEFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFGSVRPVIL 113
LE+L +H N +++ + C + V++D+ + K + D G V PV++
Sbjct: 75 LEYLSIIHSNCMEALTQLVDACTAFGINHDITVQEDVNRFEDFKRKLRDPEGLVIPVVI 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,656,685
Number of Sequences: 27780
Number of extensions: 321866
Number of successful extensions: 879
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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