Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_H04
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.56 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.98 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    24   1.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.7  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               23   2.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   3.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.1  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -3

Query: 586 SNILIYLTGHGGDGFLKFQDSEE 518
           +N L+Y+  H GD  + +Q++++
Sbjct: 197 ANTLVYMADHKGDALIVYQNADD 219


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 361 EDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKR 251
           E S +H        YI+D YT  ++EFL+    + +R
Sbjct: 11  EISKNHKEQLISNDYILDNYTSPIVEFLQQEDSSIRR 47



 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 99  IGSVVRITGLTEPKKSVIGTLLGSLLNK 182
           I ++    GLTEPKK     L  S +NK
Sbjct: 420 ISNMTEYNGLTEPKKDNKRKLSDSTMNK 447


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 474 CHICSKASASSWLV 515
           CH+C KA +  WL+
Sbjct: 45  CHLCGKAFSRPWLL 58


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -3

Query: 586 SNILIYLTGHGGDGFLKFQDSEE 518
           +N ++Y+    G+G + +Q+S++
Sbjct: 202 TNTMVYIADEKGEGLIMYQNSDD 224


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 690 IIEVMRCQLXILSVX*LAEYHLTHLAPSN 604
           +I ++RC    LSV  +  Y +T + P N
Sbjct: 1   MISMLRCIYLFLSVILITSYFVTPVMPCN 29


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 583 NILIYLTGHGGDGFLKFQDSEE 518
           N ++Y+    GD  + +Q+S+E
Sbjct: 201 NTIVYMADDKGDALIVYQNSDE 222


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -3

Query: 628 PDTPRSKQLLTDEGSNILIYLTGHGGDGF 542
           PD       L  E  N+L +    G DGF
Sbjct: 192 PDLNYRSAALDQEMKNVLTFWMNRGVDGF 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,107
Number of Sequences: 438
Number of extensions: 4290
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)