Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_G22
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 54 6e-08
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 41 6e-04
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 40 0.001
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 35 0.041
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 30 1.2
Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical p... 30 1.5
AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical ... 30 1.5
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 29 2.7
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 28 6.2
Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical pr... 27 8.2
U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical p... 27 8.2
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 27 8.2
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 8.2
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 27 8.2
AC025716-13|AAL32239.1| 289|Caenorhabditis elegans Serpentine r... 27 8.2
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 54.4 bits (125), Expect = 6e-08
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Frame = -1
Query: 300 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEE 133
FE F K++NR+YKD+++ + + +F K +++LN K+ T FGINKF+D + E
Sbjct: 43 FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAE 102
Query: 132 QQSRLGLRLPAKKT 91
RL +P+ T
Sbjct: 103 FHGRLSNVVPSNNT 116
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 41.1 bits (92), Expect = 6e-04
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Frame = -1
Query: 399 FVSVALLIATVVMASSAETDTPR-HYDLNQAKELFEIFV---KEHNREYKDDADRELHYQ 232
F++ + + SS+E + + D + +++++ FV K+ +R YK +A+ +L Q
Sbjct: 7 FLNFQAFLGIFALESSSEPEFFEINIDRDHPEKVYQEFVEFKKKFSRTYKSEAENQLRLQ 66
Query: 231 SFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSRLGLRLPAKKT 91
+F K + +LN+ + F +N+F+D T E RL R P T
Sbjct: 67 NFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSELHQRLS-RFPPNLT 116
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = -1
Query: 300 FEIFVKEHNREYKDDADRELHYQSF---KKHLAEINQLNEKNPY-TTFGINKFADYTPEE 133
FE F+ ++ R YKD+ +++ +Q F + ++N+ +K + T +GINKF+D + +E
Sbjct: 47 FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = -1
Query: 309 KELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQ 130
+++F F+ + +R+Y + E YQ F +++ E E+N +N+F D+T EE
Sbjct: 79 EQMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEEL 138
Query: 129 Q 127
Q
Sbjct: 139 Q 139
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = -1
Query: 279 HNREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 121
H + Y+ A+++ F K+ +I +LN K TFG NKFAD +E +R
Sbjct: 3 HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -1
Query: 408 KMNFVSVALLIATVVMASSAETDTPRHYD--LNQAKELFEIFVKEHNREYKDDADRELHY 235
K+N + LI+T+ S+ T P H+D +++ EI V+E E A +
Sbjct: 106 KLNDIRRRSLISTMDATSTPTTSVPIHFDSPRRESRPCLEIHVEESPEELSTHA---VEI 162
Query: 234 QSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLPA 100
F + L+E N L + + D E+ +S+ + PA
Sbjct: 163 TEFHRDLSE-NSLGTSTDHEDPSLTFRVDKELEQSESKKTTKRPA 206
>Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 622 LGLYGSVTSALKAARV*NDGQYVFNTTHYREFK*IRPADDINNITINET 476
+G + +V S+++ R+ N Q F+ + K P DD NN T+N T
Sbjct: 366 VGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP-DDFNNTTLNST 413
>AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 622 LGLYGSVTSALKAARV*NDGQYVFNTTHYREFK*IRPADDINNITINET 476
+G + +V S+++ R+ N Q F+ + K P DD NN T+N T
Sbjct: 366 VGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP-DDFNNTTLNST 413
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Frame = -1
Query: 327 YDLNQAKELFEIFVKEHNRE------YK-DDAD--RELHYQSFKKHLAEINQLNEKNPYT 175
Y K E F + H E YK DDA RE H ++ +K L N+L E+ +
Sbjct: 110 YKTEHRKHQLERFFRAHKDEEWFRLKYKPDDAKKLREAHLENVQKRLQVFNELKEQGQFN 169
Query: 174 TFGINKFAD 148
F ++ F D
Sbjct: 170 KFSLD-FGD 177
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 366 VMASSAETDTPRHYDLNQAKELFEIF-VKEHNREYKDDADRELHYQSFKKHLAEINQLNE 190
++ S DTP Y L ++L +F K + +D+ R L LA +++L E
Sbjct: 281 LIRSRVPLDTP--YALRFVQQLGRVFNSKGDSSPALNDSLRPLKNSLLTHSLARLHKLVE 338
Query: 189 KNPYTTFGINKFAD 148
+N ++T N F D
Sbjct: 339 ENDFSTAHANAFVD 352
>Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical
protein F33A8.7 protein.
Length = 168
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = -1
Query: 402 NFVSVAL-LIATVVMASSAE-TDTPRHYDLNQ 313
N+V V L L+ATVV+++ A+ TD DLNQ
Sbjct: 7 NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQ 38
>U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical
protein EEED8.2 protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 279 HNREYKDDADRELHYQSFKKHLAEINQLNEKN 184
H R +K A E+HY +F L E+ + EKN
Sbjct: 199 HERSWKPRAREEIHYFNFPNSLGELYSV-EKN 229
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 267 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 127
+ DDA ++ L+ +++ E TTFG+ K PE+++
Sbjct: 278 FSDDATYVASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 324
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 267 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 127
+ DDA ++ L+ +++ E TTFG+ K PE+++
Sbjct: 5124 FSDDATYVASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 5170
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = +2
Query: 158 LLMPNVV--YGFFSFNWF 205
LL PN++ Y FF+FNW+
Sbjct: 75 LLFPNILANYSFFTFNWY 92
>AC025716-13|AAL32239.1| 289|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 64 protein.
Length = 289
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 20 FYKQSQSISFVWPRIPLXXSRRTYVFL 100
F ++ S +WP IPL R T VFL
Sbjct: 76 FVVKNLSFYLIWPTIPLGCIRATLVFL 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,079,643
Number of Sequences: 27780
Number of extensions: 255677
Number of successful extensions: 796
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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