Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_G22
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          28   0.085
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   1.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.6  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   7.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.8  

>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 0.085
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = -3

Query: 571 NDGQYVFNTTHYREFK*IRPADDINNIT---INETTHLSERSRTRHK*TGSTVNTLRKNE 401
           NDG+   +    RE+K  R  D ++N+    + E T     SR+R +   S  N     E
Sbjct: 247 NDGERSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYRE 306

Query: 400 FRQCGVVNSHSSNG 359
           +R+     S    G
Sbjct: 307 YRETSRERSRDRRG 320



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 333 RHYDLNQAKELFEIFV-KEHNREYKDDADRELHYQSFKKHLAE 208
           RH D N  +   E    ++ +REYK D   +  +   +KHL E
Sbjct: 238 RHEDRNSYRNDGERSCSRDRSREYKKDRRYDQLHNVEEKHLRE 280


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 391 CGVVNSHSSNGVLGG 347
           CGV N H   G+LGG
Sbjct: 329 CGVHNLHGMPGILGG 343


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 98  RRHKFCDXRXAECEAKRK 45
           R H F D +  E EAKR+
Sbjct: 171 REHPFWDDQRVEQEAKRR 188


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 620 RPVRKCYFC 594
           +P+ KCYFC
Sbjct: 422 KPLDKCYFC 430


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 508 DDINNITINETTHLSERSRTRH 443
           DD+  +T    T  S+ SRT H
Sbjct: 32  DDMRTVTKRPKTKKSQGSRTTH 53


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 299 SKFSSKNITGNTRMMPTESCI 237
           +K+    IT + R++PT +CI
Sbjct: 378 AKYLRACITESLRLIPTTTCI 398


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,161
Number of Sequences: 438
Number of extensions: 3453
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)