Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_G17
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024960-1|ABE01190.1|  458|Drosophila melanogaster IP15509p pro...    29   5.8  
AE014298-1519|AAF47971.2|  458|Drosophila melanogaster CG1637-PB...    29   5.8  
AY058271-1|AAL13500.1|  982|Drosophila melanogaster GH02475p pro...    29   7.7  
AE014134-1562|AAF52710.1|  982|Drosophila melanogaster CG9466-PA...    29   7.7  

>BT024960-1|ABE01190.1|  458|Drosophila melanogaster IP15509p
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 584 VRVVIWSHQQLHDRLWPSF 640
           V V IW+H+  ++RLWP +
Sbjct: 346 VDVAIWAHEHSYERLWPIY 364


>AE014298-1519|AAF47971.2|  458|Drosophila melanogaster CG1637-PB,
           isoform B protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 584 VRVVIWSHQQLHDRLWPSF 640
           V V IW+H+  ++RLWP +
Sbjct: 346 VDVAIWAHEHSYERLWPIY 364


>AY058271-1|AAL13500.1|  982|Drosophila melanogaster GH02475p
           protein.
          Length = 982

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 159 HDTLSNYYNSTFI*NAYDNLSWKLS*DNIYITHSNVI 269
           H+T SN  N   + +++D++ W  + D  Y  H N I
Sbjct: 30  HETKSNMINIHLVPHSHDDVGWLKTVDQYYYGHRNNI 66


>AE014134-1562|AAF52710.1|  982|Drosophila melanogaster CG9466-PA
           protein.
          Length = 982

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 159 HDTLSNYYNSTFI*NAYDNLSWKLS*DNIYITHSNVI 269
           H+T SN  N   + +++D++ W  + D  Y  H N I
Sbjct: 30  HETKSNMINIHLVPHSHDDVGWLKTVDQYYYGHRNNI 66


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,280,340
Number of Sequences: 53049
Number of extensions: 461651
Number of successful extensions: 922
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)