Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_G17
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family... 32 0.43
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical ... 29 4.0
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 28 5.3
Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical p... 28 5.3
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 28 5.3
Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical ... 28 7.0
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 27 9.2
>U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family
protein 9 protein.
Length = 623
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 645 RWKEGHSRSCSCWCDQITTLTGLPVAT 565
+WK GH RS CW + TT TG+ + T
Sbjct: 548 KWKTGHRRSSICWLNG-TTDTGISITT 573
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 584 VRVVIWSHQQLHDRLWPSFHLAHTKHKGT 670
V V +W+H+ ++RLWP ++ T + GT
Sbjct: 390 VDVELWAHEHSYERLWPVYN--RTVYNGT 416
>Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical
protein F21A3.2a protein.
Length = 431
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 584 VRVVIWSHQQLHDRLWPSFHLAHTKHKGT 670
V V +W+H+ ++RLWP ++ T + GT
Sbjct: 277 VDVELWAHEHSYERLWPVYN--RTVYNGT 303
>AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical
protein Y51H1A.5 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +2
Query: 593 VIWSHQ-QLHDRLWPSFHL 646
VI+ HQ Q HD+ WPS+H+
Sbjct: 9 VIFDHQEQRHDQPWPSYHI 27
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 619 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 670
>Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 606 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 657
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 625 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 676
>Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 586 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 637
>Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical
protein T01H8.1b protein.
Length = 727
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 568 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 619
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 619 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 670
>Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 606 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 657
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 625 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 676
>Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 639 KEGHSRSCSCWCDQI---TTLTG-LPVATAPREVEDRTRWKQLTRGQGQVLRTRP 487
K+G+ RSC W + T LTG P A P + D+ + G G++ T P
Sbjct: 586 KQGYDRSCDVWSLGVLLHTMLTGCTPFAMGPNDTPDQILQRV---GDGKISMTHP 637
>AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical
protein T13B5.3 protein.
Length = 440
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 14 SARXLFHCHFSHRRSTLVTQSFNCLAISSLCPLVSF 121
S R LFH F H + + C S CPL +F
Sbjct: 371 SVRVLFHSAFHHNYHVITHLAKGCPHNSEFCPLKTF 406
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 615 SCWCDQITTLTGLPVATAPREVEDRTRWKQL 523
SC C I LTGLP T P + D +K+L
Sbjct: 993 SCRCTDIYELTGLPKKTPPSD-NDMLTYKKL 1022
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 615 SCWCDQITTLTGLPVATAPREVEDRTRWKQL 523
SC C I LTGLP T P + D +K+L
Sbjct: 993 SCRCTDIYELTGLPKKTPPSD-NDMLTYKKL 1022
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,573,691
Number of Sequences: 27780
Number of extensions: 241518
Number of successful extensions: 473
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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