Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_G15
         (469 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1372|AAF46524.2|  112|Drosophila melanogaster CG15245-P...    29   3.1  
AY118396-1|AAM48425.1|  605|Drosophila melanogaster RE56844p pro...    28   5.5  
AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p pro...    28   5.5  
AE014134-2100|AAF53123.1|  605|Drosophila melanogaster CG14940-P...    28   5.5  

>AE014298-1372|AAF46524.2|  112|Drosophila melanogaster CG15245-PA
           protein.
          Length = 112

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 380 EYLLTLLKNKLFVCTFIIVLFVCSCSPRIT 291
           +YL+ +   +L + TF+++  + + SPRIT
Sbjct: 32  DYLIKMQVQRLLILTFVVLAMILAQSPRIT 61


>AY118396-1|AAM48425.1|  605|Drosophila melanogaster RE56844p
           protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 258 GTIHKLLMTPGLLKRFLRKARASY 187
           G+IHK  + PG+L+ FL +    Y
Sbjct: 209 GSIHKFKIAPGILEAFLHRVEEGY 232


>AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p
           protein.
          Length = 834

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 258 GTIHKLLMTPGLLKRFLRKARASY 187
           G+IHK  + PG+L+ FL +    Y
Sbjct: 438 GSIHKFKIAPGILEAFLHRVEEGY 461


>AE014134-2100|AAF53123.1|  605|Drosophila melanogaster CG14940-PA
           protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 258 GTIHKLLMTPGLLKRFLRKARASY 187
           G+IHK  + PG+L+ FL +    Y
Sbjct: 209 GSIHKFKIAPGILEAFLHRVEEGY 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,817,535
Number of Sequences: 53049
Number of extensions: 294849
Number of successful extensions: 417
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)