Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_G12
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    28   0.33 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.0  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   9.2  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   9.2  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 671  REFK*IRPADAFSFLCALDLTVSG*VPSSCRRGLQPLLCDVVKR 540
            R+F  + P D        +LT+   VP+ C  G Q  +C ++K+
Sbjct: 1089 RQFCFLTPQDMSEVQATAELTIHRYVPARCGAGCQDRVCILLKK 1132


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 552  CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 439
            CG K++ +DP    E+        +R+M K+ ++ K+P
Sbjct: 1179 CGSKQLDIDP---QEVVGGAGACGVRRMAKEKMLRKRP 1213


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 425 PAPVSAKTQRHVERVVTVAL 366
           P P+  KT  H+E++  + L
Sbjct: 59  PNPLEQKTNAHIEKIFLITL 78


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 501 NTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 409
           N ++   +R  IK+GL + +PVA + RA  R
Sbjct: 370 NMHNLPYLRACIKEGLRMYQPVAGNMRAAGR 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,339
Number of Sequences: 2352
Number of extensions: 15682
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)