Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_G08
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.7
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.7
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 29 3.7
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 29 3.7
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 29 3.7
AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical... 29 4.9
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 28 6.4
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 28 6.4
AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine re... 28 6.4
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 132 bits (320), Expect = 2e-31
Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 7/227 (3%)
Frame = -2
Query: 774 GMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYMKMFELFNETLWRTSMGQH 595
G PCW+RR VG++ A D+ ++ S + + + N ++ E + ++ +T +GQ
Sbjct: 110 GKPCWFRREGVGMS-AINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQF 168
Query: 594 LDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICL 415
LD + N+ SSFT DR P+ + L++++ + + S + +
Sbjct: 169 LDTSSVNQ---ISSFTWDRYELMVENKTSHYTVFHPIQMALIISDVL--AYHGSVKKVAY 223
Query: 414 EIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQR-------TVF 256
+IG +FQ QDDF+D +GD TGK+GTDIQ+ KCTWLAV+ALQ+ + F
Sbjct: 224 QIGFLFQSQDDFLDVYGDPKITGKIGTDIQDGKCTWLAVRALQKMHKTPEKWGAKLIEEF 283
Query: 255 KACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 115
K +GS +P VE+IKR+Y++L L Q ++ EK I + I IP
Sbjct: 284 KTSFGSVDPEKVEKIKRIYDELQLKQEFRRFEKHFSGEIKKSISEIP 330
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 389 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 243
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 389 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 243
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 389 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 243
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 187 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 234
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 471 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQ 325
+LA+ D K+++ A + +G FQ+ DD +D + GK V D++
Sbjct: 256 ILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLK 305
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 389 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 243
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical
protein Y48G8AL.15 protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 180 QIY-KHQEKAMYDNIIRQIENIPIEAARV 97
Q+Y +HQ K YD ++R I + P+ A RV
Sbjct: 56 QLYAQHQGKFFYDRLVRHISSGPVIAMRV 84
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 222 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 118
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 383 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 417
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 222 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 118
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 362 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 396
>AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 68 protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 40 LSYCLMLPXVRNXQQLFKXXAGGLYW-YIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYA 216
L+ L+L + + FK Y + ++ Y+I + F L ++ + ++F +
Sbjct: 22 LNLILLLAIFCSKRVTFKSELSLFYTRFAADIGYSISISNFKLYILAVMISEIFAVKNFI 81
Query: 217 FHMCWFTATITGFEYCTLCFSTALQRLNCQPSTFALLYICTN 342
F W T I G +L F T L R+ S F + C N
Sbjct: 82 FITLWLT-IIFGIIRTSLLFLTTLDRV---ISLFFPFFYCAN 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,948,042
Number of Sequences: 27780
Number of extensions: 340511
Number of successful extensions: 905
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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