Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_G05
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical pr...    33   0.26 
Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical pr...    33   0.26 
Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U56963-6|AAB38123.3|  324|Caenorhabditis elegans Serpentine rece...    29   5.7  
U13019-9|AAC24447.1|  434|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U13875-13|AAA21156.2|  470|Caenorhabditis elegans Hypothetical p...    28   9.9  

>Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 19/84 (22%), Positives = 37/84 (44%)
 Frame = +1

Query: 319 NISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRH 498
           +  +C ++ T++  + + L VI  VI R +  VI    ++ +  H  S SI L  +W+  
Sbjct: 273 DFDTCVSLATTNCLLIVSLLVIKLVIERFVVNVISTRSVSSIETHLVSQSIYLFSMWFAL 332

Query: 499 KFVFCRTRGTCFQWIYAFSFRWST 570
           K      +       +  +  W+T
Sbjct: 333 KLAHPSAQPVAAWVFFTSNLAWTT 356


>Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 19/84 (22%), Positives = 37/84 (44%)
 Frame = +1

Query: 319 NISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRH 498
           +  +C ++ T++  + + L VI  VI R +  VI    ++ +  H  S SI L  +W+  
Sbjct: 273 DFDTCVSLATTNCLLIVSLLVIKLVIERFVVNVISTRSVSSIETHLVSQSIYLFSMWFAL 332

Query: 499 KFVFCRTRGTCFQWIYAFSFRWST 570
           K      +       +  +  W+T
Sbjct: 333 KLAHPSAQPVAAWVFFTSNLAWTT 356


>Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical
           protein F07B10.4 protein.
          Length = 724

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +1

Query: 343 KTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRHKFVFCRTR 522
           KT  +HI++ +  +   +++A+F+V+P T I  L  +F S  I      Y +  +    +
Sbjct: 627 KTVKYHIQVTVLFLCSCVIQALFVVLPVTHI-VLCVYFDSFKIYTKDYIY-YSLLTQAHQ 684

Query: 523 GTCFQWIYAFS 555
           GT F   Y  S
Sbjct: 685 GTAFTLFYVLS 695


>U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical
           protein F01G12.1 protein.
          Length = 178

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +1

Query: 424 HTLINKLWFHFGSDSIVLIFVW-YRHKFVFCRTRGTCF-QWIYA 549
           HT+  K+WFH+G D +VL   W    K       G  F  WI+A
Sbjct: 116 HTM--KMWFHWGFDEVVLFDFWRIDDKNALAVILGAGFGHWIFA 157


>U56963-6|AAB38123.3|  324|Caenorhabditis elegans Serpentine
           receptor, class v protein31 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 684 IVFVVTTWGLASKSALVWMAWNFLHF 761
           ++F  TTWGL +K  +  M + + HF
Sbjct: 59  MIFYTTTWGLRTKPGIREMLYTYQHF 84


>U13019-9|AAC24447.1|  434|Caenorhabditis elegans Hypothetical
           protein T12A2.8 protein.
          Length = 434

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 87  HHNHTPHDPFVTQHARIERXIEMYLYP 7
           HH  TP+   VT   RI+R +E+ + P
Sbjct: 45  HHQQTPNSYLVTFFTRIQRLLELKIIP 71


>U13875-13|AAA21156.2|  470|Caenorhabditis elegans Hypothetical
           protein C26E6.2 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 180 GSRVYWSCKSRRHGCAAKALT-YNGKLVSHKLH-HNHTPHDP 61
           G++ +W C+ R++ C A+  +  N + +  KLH HNH    P
Sbjct: 169 GTKEFWRCE-RKNDCNARMHSDINTREIVRKLHPHNHEKPSP 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,763,587
Number of Sequences: 27780
Number of extensions: 340840
Number of successful extensions: 895
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)