Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_G01
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   5.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   9.4  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    23   9.4  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 177 FQTRYVKKAFFYNEYKCTRKRL 242
           FQT  ++K F +N Y   R+R+
Sbjct: 148 FQTLELEKEFHFNHYLTRRRRI 169


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 210 YNEYKCTRKRLN 245
           YN Y+C R RLN
Sbjct: 58  YNIYRCDRSRLN 69


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 646 NDVSPARLRQTLGASE 693
           ND++  RLRQ +G+SE
Sbjct: 207 NDIALIRLRQDVGSSE 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,715
Number of Sequences: 2352
Number of extensions: 12607
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)