Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_F15
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0701 - 35620559-35620777,35620872-35620949,35621038-356211... 114 6e-26
12_01_1074 - 11164802-11164813,11165122-11165172,11165358-111654... 33 0.18
03_02_0026 - 5086596-5086755,5087035-5087105,5087407-5087466,508... 33 0.18
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 33 0.24
06_01_0429 - 3056302-3056570,3056681-3056951,3057055-3057206,305... 31 0.97
02_05_0651 + 30644241-30644615,30644751-30644858 28 5.2
09_04_0315 + 16600387-16600557,16600652-16600801,16600874-166008... 28 6.9
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 28 6.9
02_05_1071 - 33876061-33877308,33877593-33877898 28 6.9
01_06_0495 - 29779499-29781325 28 6.9
10_08_0008 - 14046647-14047462,14050744-14051499 27 9.1
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 27 9.1
01_01_0789 + 6133239-6133656,6134128-6134141 27 9.1
>03_06_0701 -
35620559-35620777,35620872-35620949,35621038-35621191,
35621279-35621391,35621487-35621586,35622193-35622389,
35622470-35622526,35622630-35622734,35622824-35622931,
35623651-35623848,35624022-35624024
Length = 443
Score = 114 bits (274), Expect = 6e-26
Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Frame = -3
Query: 590 ELKEKFYRLMIAVDQHNGQYLSVCRHFRAL----GTAGGPEALIGSVV----FLILAPYD 435
ELK +Y LMI HN YL +CR ++++ P I + +L+LAP+D
Sbjct: 212 ELKRIYYELMIRYYSHNNDYLEICRCYKSIYEIPSIKEDPSKWIPVLRKICWYLVLAPHD 271
Query: 434 NEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSYEKMLRATPYF--DASD 261
Q+ L + EDK L ++P+++ LL+ + E+I+W +L ++ F A
Sbjct: 272 PMQSSLLNATLEDKNLSEIPNFRLLLKQLVTMEVIQWTSLWEFFKDEYANEKNFLGGALG 331
Query: 260 DKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXXXXXXXLVVSAVVKA 81
DK E DLK R++EHNI ++S YY+RITLKR+ +V S + A
Sbjct: 332 DKAAE---DLKLRIIEHNILVVSKYYSRITLKRLADLLCLSLQEAEKHLSDMVNSKSLIA 388
Query: 80 KIDRPAGVVHFSLNMDASDRLNEWS 6
KIDRP GVV F D++ LN W+
Sbjct: 389 KIDRPMGVVCFRTAQDSNGILNSWA 413
>12_01_1074 -
11164802-11164813,11165122-11165172,11165358-11165459,
11165877-11165937,11166276-11168320
Length = 756
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = -3
Query: 383 KLPDYKELLRLFINPEIIRWNTLCSSY---EKMLRATPYFDASDDKGQERWN-DLKNRVV 216
+ D LL+ P+I+ WN++ E++ R+ +FD DK WN L+ V
Sbjct: 151 RFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVR 210
Query: 215 EHNIRIMSMYYTRI 174
++ + S +++RI
Sbjct: 211 AGDLDVASAFFSRI 224
>03_02_0026 -
5086596-5086755,5087035-5087105,5087407-5087466,
5087625-5087684,5088012-5088054,5088130-5088221,
5088304-5088372,5088458-5088502,5089209-5089317,
5089579-5089679,5089769-5089861,5089936-5089996,
5090084-5090187,5091592-5091972
Length = 482
Score = 33.1 bits (72), Expect = 0.18
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 1/159 (0%)
Frame = -3
Query: 482 EALIGSVVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSY 303
+AL +V ILA +++ + + +D+ KL Y L ++F+ I+R + ++
Sbjct: 256 QALSAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVFLE-RILRKPEI-EAF 313
Query: 302 EKMLRATPYFDAS-DDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXX 126
+ LR P+ A DK L ++EHN+ S YT I+ +
Sbjct: 314 AEELR--PHQKALLPDKSTV----LDRAMIEHNLLSASKLYTNISFDELGALLGIDPRKA 367
Query: 125 XXXXXXLVVSAVVKAKIDRPAGVVHFSLNMDASDRLNEW 9
++ ++ ID+ V+HF D ++ L +W
Sbjct: 368 EKIASRMIYEDRMRGSIDQVEAVIHFE---DDTEELQQW 403
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -3
Query: 491 GGPEALIGSVVFLILAPYDNEQADLTHRVNED--KELDKLPDYKELLRLFINPEIIRWNT 318
G L G + ++ YD E A+ + D KE+ KL Y++ ++ +I I+
Sbjct: 2 GASRKLQGEIDRVLKKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKK 61
Query: 317 LCSSYEKML 291
+ +SYE+ L
Sbjct: 62 VSASYEQAL 70
>06_01_0429 -
3056302-3056570,3056681-3056951,3057055-3057206,
3057419-3057631,3057791-3057959
Length = 357
Score = 30.7 bits (66), Expect = 0.97
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VYNASWTIDLGFNNCTHNKLTQGLFCLRLAQTEKFTHAFERDASIVHRHYANIM-FNNSV 227
++NA +TID+G N+ T N +Q + ++ + + + + NIM FN +
Sbjct: 136 LHNALYTIDIGQNDLTSNLGSQSIETVKQSLPSVVSKISSTVQELYNIGARNIMVFNMAP 195
Query: 228 LKIVPAFLT 254
+ PAFLT
Sbjct: 196 IGCYPAFLT 204
>02_05_0651 + 30644241-30644615,30644751-30644858
Length = 160
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 200 CEYYVQQLCS*DRSSVLDPCRLTRQSTVWPEASSRKK 310
C YY + + P R+T + WPE SSRK+
Sbjct: 87 CWYYKSRRYDTTYEGFMFPLRVTDELLQWPEMSSRKR 123
>09_04_0315 +
16600387-16600557,16600652-16600801,16600874-16600897,
16601519-16602694,16603120-16603266,16603477-16603752
Length = 647
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 374 DYKELLRLFINPEIIRWNTLCSSYEKMLRATPYFDASDDKGQER 243
+ + RL I+PE I W + ++ LR D+KG R
Sbjct: 226 EVRRFARLDIDPESITWRRVMDVNDRFLRKITIGQGPDEKGMVR 269
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = -3
Query: 383 KLPDYKELLRLFINPEIIRWNTLCSSY---EKMLRATPYFDASDDKGQERWNDL 231
+LPD + + I+ WN+L S Y KM+ A F + WN +
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSI 481
>02_05_1071 - 33876061-33877308,33877593-33877898
Length = 517
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 431 EQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWN 321
E AD +V + L LP YK LL +IN +I+ N
Sbjct: 452 EDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQN 488
>01_06_0495 - 29779499-29781325
Length = 608
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -3
Query: 563 MIAVDQHNGQYLSVCRHFRALGTAGG-PEALIGSVVFLILAPY-DNEQADLTHRVNEDKE 390
MIA H G+Y R FR + + G P A+ + +F I A D E + +++
Sbjct: 188 MIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQD 247
Query: 389 LDKLPDYKELLRLFI 345
L + + L+ +++
Sbjct: 248 LQNMIVHTALMEMYV 262
>10_08_0008 - 14046647-14047462,14050744-14051499
Length = 523
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = +3
Query: 126 CLRLAQTEKFTHAFE------RDASIVHRHYANIMFNNSVLKIVPAFLTLVV*RVKVRCG 287
CLR A+ E F R + + ++FN+S+L P+F +L+V R +R G
Sbjct: 167 CLRTAREESHAVIFGVVDEVLRKSGVAAADVGVLIFNSSLLSPTPSFTSLIVNRYGMRPG 226
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 308 SYEKMLRATPYF---DASDDKGQERWNDLKNRVVEHNIRIMSMYYTRI 174
S +K R TP F +A DK Q+R + + H IR S +T I
Sbjct: 724 SLDKPKRRTPAFSGRNAGQDKSQQRTRSMSHSPERHRIRGRSPAFTAI 771
>01_01_0789 + 6133239-6133656,6134128-6134141
Length = 143
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 421 SACSLSYGANIRNTTL-PISASGPPAVPKARKCRQTDRYCPLCWSTAI 561
S S A IR TT SAS PPA KC Q+ + P C +T +
Sbjct: 39 SLLSNPVSAVIRLTTSNSASASSPPAAAPEEKCEQSYGFLP-CTTTVL 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,145,860
Number of Sequences: 37544
Number of extensions: 286995
Number of successful extensions: 756
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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