Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F15
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    29   0.12 
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   1.9  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   7.8  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 409 LCVRSACSLSYGANIRNTTLPISASGPPAVPKA 507
           L VR   SL+ G+N+       SAS PP +P A
Sbjct: 142 LAVRPVESLTSGSNVAAAAAGASASTPPTIPSA 174


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 606 RRKYSGAEREVLPTDDSCG 550
           RRK +   R++LP D  CG
Sbjct: 1   RRKRNSGARQILPEDSLCG 19


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 421 SACSLSYGANIRNTTLPISASGPPAVPK 504
           S C  S  A++ N   P S+ G PA P+
Sbjct: 256 SLCPTSPPASVSNGEQPASSVGDPANPQ 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,386
Number of Sequences: 2352
Number of extensions: 12070
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)