Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_F15
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065826-1|AAH65826.1| 397|Homo sapiens proteasome (prosome, ma... 207 3e-53
BC019062-1|AAH19062.1| 456|Homo sapiens proteasome (prosome, ma... 207 3e-53
AB003103-1|BAA19749.1| 456|Homo sapiens 26S proteasome subunit ... 207 3e-53
AK222679-1|BAD96399.1| 456|Homo sapiens proteasome 26S non-ATPa... 201 2e-51
BC093007-1|AAH93007.1| 406|Homo sapiens COP9 constitutive photo... 38 0.022
BC009292-1|AAH09292.1| 406|Homo sapiens COP9 constitutive photo... 38 0.022
BC004302-1|AAH04302.1| 406|Homo sapiens COP9 constitutive photo... 38 0.022
AK223178-1|BAD96898.1| 406|Homo sapiens COP9 signalosome subuni... 38 0.022
AK001210-1|BAA91555.1| 394|Homo sapiens protein ( Homo sapiens ... 38 0.022
AF100757-1|AAD43021.1| 405|Homo sapiens COP9 complex subunit 4 ... 38 0.022
U76010-1|AAB39732.1| 388|Homo sapiens ZnT-3 protein. 31 3.3
BC028358-1|AAH28358.1| 388|Homo sapiens solute carrier family 3... 30 7.6
AK127096-1|BAC86827.1| 169|Homo sapiens protein ( Homo sapiens ... 30 7.6
AC013413-2|AAY24294.1| 388|Homo sapiens unknown protein. 30 7.6
>BC065826-1|AAH65826.1| 397|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 12 protein.
Length = 397
Score = 207 bits (505), Expect = 3e-53
Identities = 102/219 (46%), Positives = 146/219 (66%), Gaps = 14/219 (6%)
Frame = -3
Query: 620 TKFFEDENTQELKEKFYRLMIAVDQHNGQYLSVCRHFRAL--------GTAGGPEALIGS 465
TKFF++ENT++LK K+Y LMI +DQH G YLS+C+H+RA+ + +AL
Sbjct: 152 TKFFQEENTEKLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKSV 211
Query: 464 VVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSYEKMLRA 285
V+++ILAP+DNEQ+DL HR++ DK+L+++P YK+LL+LF E++RW+TL Y LR
Sbjct: 212 VLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELRK 271
Query: 284 ----TPYFDA--SDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
+P D S ++G++RW DLKNRVVEHNIRIM+ YYTRIT+KRM
Sbjct: 272 GSLESPATDVFGSTEEGEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESE 331
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHFSLNMDASDRLNEWS 6
LVV+ + AK+DR AG+++F D ++ LN+WS
Sbjct: 332 AFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 370
>BC019062-1|AAH19062.1| 456|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 12 protein.
Length = 456
Score = 207 bits (505), Expect = 3e-53
Identities = 102/219 (46%), Positives = 146/219 (66%), Gaps = 14/219 (6%)
Frame = -3
Query: 620 TKFFEDENTQELKEKFYRLMIAVDQHNGQYLSVCRHFRAL--------GTAGGPEALIGS 465
TKFF++ENT++LK K+Y LMI +DQH G YLS+C+H+RA+ + +AL
Sbjct: 211 TKFFQEENTEKLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKSV 270
Query: 464 VVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSYEKMLRA 285
V+++ILAP+DNEQ+DL HR++ DK+L+++P YK+LL+LF E++RW+TL Y LR
Sbjct: 271 VLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELRK 330
Query: 284 ----TPYFDA--SDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
+P D S ++G++RW DLKNRVVEHNIRIM+ YYTRIT+KRM
Sbjct: 331 GSLESPATDVFGSTEEGEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESE 390
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHFSLNMDASDRLNEWS 6
LVV+ + AK+DR AG+++F D ++ LN+WS
Sbjct: 391 AFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 429
>AB003103-1|BAA19749.1| 456|Homo sapiens 26S proteasome subunit p55
protein.
Length = 456
Score = 207 bits (505), Expect = 3e-53
Identities = 102/219 (46%), Positives = 146/219 (66%), Gaps = 14/219 (6%)
Frame = -3
Query: 620 TKFFEDENTQELKEKFYRLMIAVDQHNGQYLSVCRHFRAL--------GTAGGPEALIGS 465
TKFF++ENT++LK K+Y LMI +DQH G YLS+C+H+RA+ + +AL
Sbjct: 211 TKFFQEENTEKLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKSV 270
Query: 464 VVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSYEKMLRA 285
V+++ILAP+DNEQ+DL HR++ DK+L+++P YK+LL+LF E++RW+TL Y LR
Sbjct: 271 VLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELRK 330
Query: 284 ----TPYFDA--SDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
+P D S ++G++RW DLKNRVVEHNIRIM+ YYTRIT+KRM
Sbjct: 331 GSLESPATDVFGSTEEGEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESE 390
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHFSLNMDASDRLNEWS 6
LVV+ + AK+DR AG+++F D ++ LN+WS
Sbjct: 391 AFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 429
>AK222679-1|BAD96399.1| 456|Homo sapiens proteasome 26S non-ATPase
subunit 12 isoform 1 variant protein.
Length = 456
Score = 201 bits (490), Expect = 2e-51
Identities = 100/219 (45%), Positives = 144/219 (65%), Gaps = 14/219 (6%)
Frame = -3
Query: 620 TKFFEDENTQELKEKFYRLMIAVDQHNGQYLSVCRHFRAL--------GTAGGPEALIGS 465
TKFF++ENT++LK K+Y LMI +DQH G YLS+C+H+RA+ + +AL
Sbjct: 211 TKFFQEENTEKLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKSV 270
Query: 464 VVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSYEKMLRA 285
V+++ILAP+DNEQ+DL HR++ DK+L+++ YK+LL+LF E++RW+TL Y LR
Sbjct: 271 VLYVILAPFDNEQSDLVHRISGDKKLEEISKYKDLLKLFTTMELMRWSTLVEDYGMELRK 330
Query: 284 ----TPYFDA--SDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
+P D S ++G++RW DLKNRVVEHNIRIM+ YYTRIT+KRM
Sbjct: 331 GSLESPATDVFGSTEEGEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESE 390
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHFSLNMDASDRLNEWS 6
LV + + AK+DR AG+++F D ++ LN+WS
Sbjct: 391 AFLSNLVDNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 429
>BC093007-1|AAH93007.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 38.3 bits (85), Expect = 0.022
Identities = 35/145 (24%), Positives = 63/145 (43%)
Frame = -3
Query: 482 EALIGSVVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSY 303
EAL ++ ILA +++ + + +D+ +L Y L +++++ IIR N L +
Sbjct: 224 EALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLD-RIIRGNQL-QEF 281
Query: 302 EKMLRATPYFDASDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
ML P+ A+ G + L V+EHN+ S Y IT + +
Sbjct: 282 AAMLM--PHQKATTADGS---SILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAE 336
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHF 48
++ + ID+ G+VHF
Sbjct: 337 KIASQMITEGRMNGFIDQIDGIVHF 361
>BC009292-1|AAH09292.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 38.3 bits (85), Expect = 0.022
Identities = 35/145 (24%), Positives = 63/145 (43%)
Frame = -3
Query: 482 EALIGSVVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSY 303
EAL ++ ILA +++ + + +D+ +L Y L +++++ IIR N L +
Sbjct: 224 EALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLD-RIIRGNQL-QEF 281
Query: 302 EKMLRATPYFDASDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
ML P+ A+ G + L V+EHN+ S Y IT + +
Sbjct: 282 AAMLM--PHQKATTADGS---SILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAE 336
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHF 48
++ + ID+ G+VHF
Sbjct: 337 KIASQMITEGRMNGFIDQIDGIVHF 361
>BC004302-1|AAH04302.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 38.3 bits (85), Expect = 0.022
Identities = 35/145 (24%), Positives = 63/145 (43%)
Frame = -3
Query: 482 EALIGSVVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSY 303
EAL ++ ILA +++ + + +D+ +L Y L +++++ IIR N L +
Sbjct: 224 EALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLD-RIIRGNQL-QEF 281
Query: 302 EKMLRATPYFDASDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
ML P+ A+ G + L V+EHN+ S Y IT + +
Sbjct: 282 AAMLM--PHQKATTADGS---SILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAE 336
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHF 48
++ + ID+ G+VHF
Sbjct: 337 KIASQMITEGRMNGFIDQIDGIVHF 361
>AK223178-1|BAD96898.1| 406|Homo sapiens COP9 signalosome subunit 4
variant protein.
Length = 406
Score = 38.3 bits (85), Expect = 0.022
Identities = 35/145 (24%), Positives = 63/145 (43%)
Frame = -3
Query: 482 EALIGSVVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSY 303
EAL ++ ILA +++ + + +D+ +L Y L +++++ IIR N L +
Sbjct: 224 EALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLD-RIIRGNQL-QEF 281
Query: 302 EKMLRATPYFDASDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
ML P+ A+ G + L V+EHN+ S Y IT + +
Sbjct: 282 AAMLM--PHQKATTADGS---SILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAE 336
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHF 48
++ + ID+ G+VHF
Sbjct: 337 KIASQMITEGRMNGFIDQIDGIVHF 361
>AK001210-1|BAA91555.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ10348 fis, clone NT2RM2001065. ).
Length = 394
Score = 38.3 bits (85), Expect = 0.022
Identities = 35/145 (24%), Positives = 63/145 (43%)
Frame = -3
Query: 482 EALIGSVVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSY 303
EAL ++ ILA +++ + + +D+ +L Y L +++++ IIR N L +
Sbjct: 212 EALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLD-RIIRGNQL-QEF 269
Query: 302 EKMLRATPYFDASDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
ML P+ A+ G + L V+EHN+ S Y IT + +
Sbjct: 270 AAMLM--PHQKATTADGS---SILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAE 324
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHF 48
++ + ID+ G+VHF
Sbjct: 325 KIASQMITEGRMNGFIDQIDGIVHF 349
>AF100757-1|AAD43021.1| 405|Homo sapiens COP9 complex subunit 4
protein.
Length = 405
Score = 38.3 bits (85), Expect = 0.022
Identities = 35/145 (24%), Positives = 63/145 (43%)
Frame = -3
Query: 482 EALIGSVVFLILAPYDNEQADLTHRVNEDKELDKLPDYKELLRLFINPEIIRWNTLCSSY 303
EAL ++ ILA +++ + + +D+ +L Y L +++++ IIR N L +
Sbjct: 223 EALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLD-RIIRGNQL-QEF 280
Query: 302 EKMLRATPYFDASDDKGQERWNDLKNRVVEHNIRIMSMYYTRITLKRMXXXXXXXXXXXX 123
ML P+ A+ G + L V+EHN+ S Y IT + +
Sbjct: 281 AAMLM--PHQKATTADGS---SILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAE 335
Query: 122 XXXXXLVVSAVVKAKIDRPAGVVHF 48
++ + ID+ G+VHF
Sbjct: 336 KIASQMITEGRMNGFIDQIDGIVHF 360
>U76010-1|AAB39732.1| 388|Homo sapiens ZnT-3 protein.
Length = 388
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 482 QGPQQFLKLGNADRLTDIVHYAGPQLSSVGKTSLSAPEYFRLQ 610
+GP+Q L LGN VH G L S G + S YF+ Q
Sbjct: 219 EGPEQPLPLGNTSVRAAFVHVLGDLLQSFGVLAASILIYFKPQ 261
>BC028358-1|AAH28358.1| 388|Homo sapiens solute carrier family 30
(zinc transporter), member 3 protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 482 QGPQQFLKLGNADRLTDIVHYAGPQLSSVGKTSLSAPEYFRLQ 610
+GP++ L LGN VH G L S G + S YF+ Q
Sbjct: 219 EGPEEPLPLGNTSVRAAFVHVLGDLLQSFGVLAASILIYFKPQ 261
>AK127096-1|BAC86827.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ45153 fis, clone BRAWH3042772, highly similar
to Zinc transporter 3 (ZnT-3). ).
Length = 169
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 482 QGPQQFLKLGNADRLTDIVHYAGPQLSSVGKTSLSAPEYFRLQ 610
+GP++ L LGN VH G L S G + S YF+ Q
Sbjct: 26 EGPEEPLPLGNTSVRAAFVHVLGDLLQSFGVLAASILIYFKPQ 68
>AC013413-2|AAY24294.1| 388|Homo sapiens unknown protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 482 QGPQQFLKLGNADRLTDIVHYAGPQLSSVGKTSLSAPEYFRLQ 610
+GP++ L LGN VH G L S G + S YF+ Q
Sbjct: 219 EGPEEPLPLGNTSVRAAFVHVLGDLLQSFGVLAASILIYFKPQ 261
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,810,409
Number of Sequences: 237096
Number of extensions: 1608304
Number of successful extensions: 3776
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3765
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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