Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F11
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.77 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   5.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -3

Query: 353 PLICWSSCRGRC-WREMSGTWSAPRAPSGHS 264
           PL C      RC  RE S +   PR PSG S
Sbjct: 73  PLNCRDLPNSRCNSRESSDSLVQPRCPSGES 103


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -3

Query: 299 TWSAPRAPSGHSPPTTTRPSCCCAVL 222
           +WS  R  +G   P    PS C  ++
Sbjct: 530 SWSQKRPGAGKFTPEDINPSLCTHII 555


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +3

Query: 225 HCATTTWPC 251
           HC  TTW C
Sbjct: 155 HCNNTTWRC 163


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -3

Query: 347 ICWSSCRGRCWREMSGTWSAPRAPSG 270
           +C+S+     W E++  WS+  + +G
Sbjct: 318 VCYSTIGTVSWCELNFDWSSQVSKAG 343


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 142 TADLHQHRLTSHVIINTNFIHSFY 71
           TA+ H H  +SH     N+  ++Y
Sbjct: 287 TANGHGHNTSSHNYYAQNYAPTYY 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,982
Number of Sequences: 336
Number of extensions: 1752
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)