Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F08
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    45   2e-06
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    28   0.28 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.87 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.87 

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 22/61 (36%), Positives = 33/61 (54%)
 Frame = -3

Query: 785 KMIGPKLDEIAAXXXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSGANV 606
           K+I PKL+E                     +A++YNI SMPTF+F+K  + + +FSGAN 
Sbjct: 36  KVIAPKLEEFQNKYADKIVVVKVDVDECEELAAQYNIASMPTFLFIKRKEVVGQFSGANA 95

Query: 605 D 603
           +
Sbjct: 96  E 96


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = -3

Query: 461 NEFEDINFFVFAASGMQKILVLL*SNNSINKTRY*LIIYNPNCI 330
           N+F   ++F+ AAS  + +++LL S+ S++   Y L +   + I
Sbjct: 252 NDFRSEDWFIQAASSPKDVIILLDSSGSMSGKEYQLAVATASAI 295


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 409 FCIPEAANTKKLISSNSLQTLKTFFIYILKTY--TCFFFKFHLSFHRRLRTTLVSIYLCL 582
           F +P  +  K  +S + L +L  FF+ +++    T       L  +      LVSI +C+
Sbjct: 265 FYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPL-LGKYLIFAMILVSISICV 323

Query: 583 RIVVLSLSTLAPE 621
            +VVL++   +P+
Sbjct: 324 TVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 409 FCIPEAANTKKLISSNSLQTLKTFFIYILKTY--TCFFFKFHLSFHRRLRTTLVSIYLCL 582
           F +P  +  K  +S + L +L  FF+ +++    T       L  +      LVSI +C+
Sbjct: 265 FYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPL-LGKYLIFAMILVSISICV 323

Query: 583 RIVVLSLSTLAPE 621
            +VVL++   +P+
Sbjct: 324 TVVVLNVHFRSPQ 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,022
Number of Sequences: 2352
Number of extensions: 11300
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)