Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F06
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.58 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   4.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   4.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   7.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   7.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   9.5  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -1

Query: 297 HLYTHCWN*LRSLGLLIYNYTIISVK*QVALLNLH 193
           H++ H W  L    L    Y II  K  VAL N H
Sbjct: 542 HVWIHPWIPLLDTRLQAIIYPIIQEKLGVALTNWH 576


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 89  RALFTLWYLSTCNILKQV*CQDLLXIVN 6
           ++L   +YL+ C I+     + +L IVN
Sbjct: 306 KSLKRKFYLTICTIMSAAAVEHILSIVN 333


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 253 QSQTSQLVPAVCVEMC 300
           ++Q S L+ +VC ++C
Sbjct: 184 KAQNSNLLKSVCADLC 199


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 90  SRGTPXNLRYCTNFLFV 140
           S+  P +LR+C N L +
Sbjct: 310 SKFRPSSLRFCLNILSI 326


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 90  SRGTPXNLRYCTNFLFV 140
           S+  P +LR+C N L +
Sbjct: 35  SKFRPSSLRFCLNILSI 51


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 61  DRYHNVNKARHEALRL 108
           DR+ + +K R E LRL
Sbjct: 297 DRFSDESKKRRELLRL 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,317
Number of Sequences: 336
Number of extensions: 1567
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)