Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F03
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.3  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 222 VTILSYKLVCNQFGMTNIKIFFKSTNIYALRYY 320
           V+I S     N+  +  + +FFK  ++Y   YY
Sbjct: 49  VSIYSKSFHRNEIHIKIVLMFFKEASLYCFNYY 81


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 688 YYF***YDTFLTEINNFCCFXIYLCIYSF 602
           YYF   +  F   +  +C   I LCIY F
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCIYYF 241


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 476 WLMPVKILCSYILWIFSSYIIYYSLRIFVKFILFINIV 589
           W++ V+I C  I +   S+ I  SL   +  ++ ++I+
Sbjct: 59  WIIYVRIYCKEIRFFEISFEILGSLDSLILLMVLVSII 96


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 220 LVFFSFPVTDTIFVYI 173
           L+FF FP+   I VYI
Sbjct: 243 LIFFIFPLAILIIVYI 258


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 446 RFLIVIHINLWLMPVKILCSYILWIFSSYIIYYSLRIFVKFILFINIV 589
           RF + I      +P+ + C Y    + S++IY +  I    IL +N+V
Sbjct: 318 RFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNI---IILGLNVV 362


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 446 RFLIVIHINLWLMPVKILCSYILWIFSSYIIYYSLRIFVKFILFINIV 589
           RF + I      +P+ + C Y    + S++IY +  I    IL +N+V
Sbjct: 43  RFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNI---IILGLNVV 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,429
Number of Sequences: 336
Number of extensions: 2667
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)