Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F01
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   7.7  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 377 KIVNFQLTMFNFCL-IVFLESSSKLL 303
           KI NF LT FN  L I+ + S  K++
Sbjct: 64  KIANFMLTFFNVSLRIILVFSKGKVI 89


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 586 LICMYTVFIRMLFLQLHLLH*YCKCY 663
           L+C+Y  +   +   +HLL   C  Y
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYY 135



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 586 LICMYTVFIRMLFLQLHLLH*YCKCYSSLH 675
           L+C+Y  F   +   +HLL      + ++H
Sbjct: 163 LLCIYHFFCAFIIFTMHLLFCCAFIFFNMH 192



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +1

Query: 586 LICMYTVFI-RMLFLQLHLLH*YCKCYSSLH 675
           +  M+ +F    +F  +HLL   C  Y +LH
Sbjct: 175 IFTMHLLFCCAFIFFNMHLLFLLCLDYFTLH 205


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 617 MRINTVYIHISFV*YLLVSFSFYLKLTVI 531
           MR+   YI IS    + VS   Y   TV+
Sbjct: 1   MRLKWYYITISMAFIIFVSLEIYHIYTVV 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,329
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)