Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F01
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    32   0.016
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.7  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 32.3 bits (70), Expect = 0.016
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -2

Query: 727 WILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           W + + + + LY  L+ +E N+ ++  + K  I GT C+
Sbjct: 370 WFMTNSIIKLLYTQLNLDEFNFFVWRANIKQIIKGTVCD 408


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 478 TKLENRSKKNTNH 516
           ++L NRS +NTNH
Sbjct: 660 SRLRNRSARNTNH 672


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 54   FTLQXILFSLSNHCAKFSAXSTIK 125
            F L  + F   NH  K  A ST+K
Sbjct: 1345 FNLADVQFERDNHYLKLPASSTLK 1368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,186
Number of Sequences: 2352
Number of extensions: 10938
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)